Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1938 |
Symbol | |
ID | 4278850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2298262 |
End bp | 2299329 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638134722 |
Product | quinolinate synthetase |
Protein accession | YP_750622 |
Protein GI | 114563109 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0379] Quinolinate synthase |
TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.43657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTGT CGGCACCTAG AATTGAAATG ATTGAATATC CGTTTCCGCC AAAACCTGCC GTGTTGTCTG ACGTTGAGAA AGCACAATAT AAAGCACGTA TTAAACAGCT ATTGATTGAT CAAAACGCGG TACTTGTTGC CCATTATTAT ACTGATCCTG AAATCCAAGC GTTAGCTGAA GAGACGGGCG GTTGCGTGTC TGATTCTCTG GAAATGGCAC GCTTCGGTCG CGATCACCCC GCAAAGACAT TAATTGTTGC TGGGGTTAAG TTTATGGGCG AAACCGCTAA AATATTAAGC CCAGAAAAAA CCATTTTAAT GCCAACCCTA GAAGCAACCT GCTCATTAGA TTTAGGTTGT CCAATTGAGC AGTTCAATGA ATTTTGCGAT GCGCATCCAG ATCATACTGT CGTGGTATAT GCCAATACCT CAGCAGCAGT AAAAGCCCGC GCAGATTGGG TTGTCACCTC CAGTATTGCG TTAGAAATTG TTGAGCATCT CGATAGCCAG GATAAAAAAA TTATCTGGGC ACCCGATCGT CACTTAGGTT CGTATATCAA CACACAAACT GGCGCTGACA TGTTGTTATG GCAGGGCGAA TGTATTGTGC ATGATGAGTT TCAAGCCAAA GCACTTCGTG AGCTTAAAAA ACAGCATCCT ACGGCGGCGA TTCTAGTACA CCCAGAATCA CCTGCCAGTG TAGTAGAACT TGCTGATGCT GTCGGCTCTA CCAGTCAGTT AATTAAAGCC GCGCAAACCA TGCCTAACGA TACCTTTATC GTTGCGACAG ATCGCGGTAT TTTTTATAAA ATGCAGCAAG CAGCGCCAGG TAAAACCTTG CTCGAAGCCC CAACTGGCGG CAACGGTGCC ACCTGTAAAA GTTGTGCCCA TTGCCCGTGG ATGGCCATGA ACGGTTTGCA AGCTATTGAA GCTTCATTAG TCGATAGCGA TAAAACTAAT CATGAAATAT TTGTGGATGA AGAACTGCGT ATCAAAGCTC TCATCCCACT CACACGCATG CTTGATTTTG CTAAAGAATT GAACATGAAA GTGAAGGGCA ACGCCTAA
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Protein sequence | MSLSAPRIEM IEYPFPPKPA VLSDVEKAQY KARIKQLLID QNAVLVAHYY TDPEIQALAE ETGGCVSDSL EMARFGRDHP AKTLIVAGVK FMGETAKILS PEKTILMPTL EATCSLDLGC PIEQFNEFCD AHPDHTVVVY ANTSAAVKAR ADWVVTSSIA LEIVEHLDSQ DKKIIWAPDR HLGSYINTQT GADMLLWQGE CIVHDEFQAK ALRELKKQHP TAAILVHPES PASVVELADA VGSTSQLIKA AQTMPNDTFI VATDRGIFYK MQQAAPGKTL LEAPTGGNGA TCKSCAHCPW MAMNGLQAIE ASLVDSDKTN HEIFVDEELR IKALIPLTRM LDFAKELNMK VKGNA
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