| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1937 |
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| Symbol | |
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| ID | 4278849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2296537 |
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| End bp | 2298159 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134721 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_750621 |
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| Protein GI | 114563108 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAG ATTTTATTTT ACCCGACATC GGTGAAGGTG TGGTGGAATG TGAATTAGTT
GATTGGTTAG TCAGCGAAGG TGACATCGTC ACAGAAGATC AACCGATAGC AGATGTAATG
ACAGACAAAG CTTTGGTGCA AATTCCGGCG CCCCATGCTG GAAAAATTAC CAAGCTTTAT
TACGCCAAAG GTGAAATCGC CATTGTGCAT CAACCATTGT ACGCAGTAGA AATGGATGGA
GATGACAACG ATAGCGTCAT TGAAGCCCCT GTTGCTGCCA TGACACCGGT TAACGATTCA
GCTGTTAACA ACAACAGTAA TGCAGTTACG GCTACAACCA GCAGTCAGTC AAACATTGAA
GAGTTCTTAT TGCCTGATAT CGGTGAAGGG ATTGTTGAAT GTGAATTGGT TGATTGGTTA
GTCGAAGAAG GCGATATCGT CGTTGAAGAT CAACCCATCG CTGATGTGAT GACCGATAAA
GCGTTAGTGC AAATCCCGGC CATGAAAGCC GGTAAAATTG TAAAACTGCA TTATCGTAAA
GGTCAGCTTG CTAAAGTGCA CTCACCTTTA TTCGCCATTG AAGTGGAAGC TGAAGTTAAT
GCTCCGTCAG CTCCAGTTGA AGTAGTTGAA CAAGCACAAG CAGCTGCGCC ACAAGTTAAC
CTTGAACCTG TTGCACAAGG TAAAGCCTTA GCTAGCCCAG CCGTTCGCCG AATGGCGCGA
GTACTGGACA TTAATATCGC TATGGTTGTG GGCACAGGCA AAAATGGTCG AGTTTACAAA
GAAGATATTG AACGTCATCA GCAAGGTGGT CATGCCACTC AAGCTGCAGC AAGCACAACG
GCAGTGTCAT CAACGAGTCA CGTAAGTGCT CAAGTTGTCA GTTCTGTGAA TAGCGACACA
GTGACTAATG TAACGGCAAG TGACCGAGTT GAACCCATAA AGGGCGTCAA AGCCATTATG
GCGAAAATGA TGGTTGAGTC AGTATCGACT ATCCCTCATT TTACTTACTG TGAAGAGTTT
GACCTTACCG AACTCGTAGC CTTACGTGAA AGCATGAAGC AACGTTATTC AACTGACGAA
GTGAAGCTCA CCATGATGCC ATTCTTTATG AAGGCCATGT CATTAGCGAT CACTGAATTT
CCGATATTGA ATAGTCAAGT TAATGCAGAT TGCACCGAGT TAACGTACAA GTCACGTCAT
AATATTGGTA TGGCAGTCGA CTCTAAAGTC GGTTTATTGG TGCCAAATGT CAAAGATGTG
CAAAGTAAGT CTATTTTAGA TATTGCCGCC GACATAACTC GCTTAACGAC TGCCGCGCGC
AGTGGCCGCG TGTCGCCAGC AGATTTAAAA GACGGAACTA TTTCAATCTC CAATATTGGT
GCATTGGGCG GCACGGTGGC AACACCAATT ATTAACAAAC CTGAAGTGGC CATTGTTGCG
TTAGGCAAGT TACAAATATT GCCGCGCTTT AATGCTAAAG GCGAAGTTGA AGCACGTAAG
ATTATGCAAG TAAGCTGGTC TGGCGATCAT CGCGTCATTG ACGGTGGCAC CATTGCACGC
TTCTGTAATC TATGGAAACA CTACTTAGAG CAACCGCAAG AAATGCTATT AGCTATGCGT
TAA
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| Protein sequence | MIKDFILPDI GEGVVECELV DWLVSEGDIV TEDQPIADVM TDKALVQIPA PHAGKITKLY
YAKGEIAIVH QPLYAVEMDG DDNDSVIEAP VAAMTPVNDS AVNNNSNAVT ATTSSQSNIE
EFLLPDIGEG IVECELVDWL VEEGDIVVED QPIADVMTDK ALVQIPAMKA GKIVKLHYRK
GQLAKVHSPL FAIEVEAEVN APSAPVEVVE QAQAAAPQVN LEPVAQGKAL ASPAVRRMAR
VLDINIAMVV GTGKNGRVYK EDIERHQQGG HATQAAASTT AVSSTSHVSA QVVSSVNSDT
VTNVTASDRV EPIKGVKAIM AKMMVESVST IPHFTYCEEF DLTELVALRE SMKQRYSTDE
VKLTMMPFFM KAMSLAITEF PILNSQVNAD CTELTYKSRH NIGMAVDSKV GLLVPNVKDV
QSKSILDIAA DITRLTTAAR SGRVSPADLK DGTISISNIG ALGGTVATPI INKPEVAIVA
LGKLQILPRF NAKGEVEARK IMQVSWSGDH RVIDGGTIAR FCNLWKHYLE QPQEMLLAMR
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