| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1935 |
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| Symbol | |
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| ID | 4278847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2294368 |
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| End bp | 2295546 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134719 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_750619 |
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| Protein GI | 114563106 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.178975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACG CACCACTGAC CAATGAAACA GTGCACCGTG TCAGCTTCTT AGACAAAGCG
TCATTGCACA TCCCCATTTT GCGTATTTTG CAAGCCGATG GCACTACGTA TGAAAACGCG
GTTCTACCAG TAATCGACAA GGCTTTGGCC GAAAAAATCT TTGATACTTG TGTTTTTACA
CGCGTATTAG ACGAGCGTAT GTTGGGTGCG CAGCGTCAAG GAAGGATTAG TTTTTACATG
ACCTGTACCG GTGAAGAAGC CTCAATTATT GGCAGCACAG CAGCGCTTGA TAAAGACGAT
GTCATTTTGG CTCAATATCG TGAGCACGCC TCATTGCGTT ATCGCGGTTT TACGACTGAA
CAATTTATGA ATCAAATGTT CAGTAACGAG AAAGATTTAG GTAAAGGTCG TCAAATGCCG
ATTCATTACG GCAGCCGCGA ACTCAACTAC CAAACCATTT CATCACCACT GGCAACTCAA
ATTCCACAAG CCACAGGTGT TGCTTATGGT ATGAAGCTGC AAGGCAAGCG TAACGTCGCC
ATTTGTTACT TTGGCGAAGG TGCAGCATCA GAAGGTGACT TCCATGCTGG TTTGAACATG
GCTGCAGTGC TTAAGTCTCC GACCATCTTT TTCTGTCGTA ACAATGGTTA TGCTATTTCA
ACCCCTACAG AAGAGCAATT TGCCGGTAAC GGTATTGCGA GTCGTGGAGT TGGGTACGGT
ATGCATACCA TTCGTGTAGA TGGTAACGAC ATGCTAGCGG TGTTAGCTGC CACACAACAA
GCCCGTGCCC ATGCACTAGA ACATAATGCA CCGGTATTAA TCGAAGCGAT GACTTATCGT
TTGGGCGCGC ATTCTTCATC AGACGATCCA TCTGGTTATC GTTCAAAAGA AGAAGAAGCC
AAATGGCAGC AACACGATCC AGTAAAACGT TTTAAGTTAT GGATGGTCAA TAAAGGCTGG
ATAACTGAAG CCGATGAAGC CAAGTTATTT GAACGTTATC GCGAAGAAGT GCTAGCAGCA
GTTAAAGTGG CTGAAAAGTT ACCTATTCCG AAACTAGATG AAATTATTGA AGATGTGCTT
GATAAACCGA CCCCAGCATT GAGAAAACAG CTTAAAGAGC TGAAAGAACA CATTGCTAAG
TATCCAAAAG CCTATCCAAA AAGCGCAGGG AGACTCTAA
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| Protein sequence | MSNAPLTNET VHRVSFLDKA SLHIPILRIL QADGTTYENA VLPVIDKALA EKIFDTCVFT
RVLDERMLGA QRQGRISFYM TCTGEEASII GSTAALDKDD VILAQYREHA SLRYRGFTTE
QFMNQMFSNE KDLGKGRQMP IHYGSRELNY QTISSPLATQ IPQATGVAYG MKLQGKRNVA
ICYFGEGAAS EGDFHAGLNM AAVLKSPTIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG
MHTIRVDGND MLAVLAATQQ ARAHALEHNA PVLIEAMTYR LGAHSSSDDP SGYRSKEEEA
KWQQHDPVKR FKLWMVNKGW ITEADEAKLF ERYREEVLAA VKVAEKLPIP KLDEIIEDVL
DKPTPALRKQ LKELKEHIAK YPKAYPKSAG RL
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