Gene Sfri_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1908 
Symbol 
ID4278820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2260064 
End bp2260624 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID638134692 
Productelongation factor P 
Protein accessionYP_750592 
Protein GI114563079 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000484999 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG CTCATGAAAT CCGTCCTGGT AACGTGATCA TGTTAGATGG CAGCCCATGG 
GTTGTTCAGA AGACTGAAAC AACTCGTTCT GGCCGTAACG CTGCAATCGT TAAGTTAAAA 
TTAAAGAACG TATTGCTAGA TTCTGGTACT GAACAAACCT TCAAAGGTGA AGACAAATTA 
GACGATATTA TTTTAGAACG TCTTGATTGT ACTTACTCAT ACTTCGCTGA CCCTATGTAT 
GTATTCATGG ATGAAGAATA CAACCAGTAT GATGTAGAAG CTGACAACTT AGGTGATGCT 
GCTGACTATA TCATTGATGG TATGGAAGAC GTTTGCCAAG TGACCTTCTA TGAAGGCAAG 
GCTATTTCTG TTGAATTACC AGTGCACATT GTTCGTGAAG TTATCTACAC CGAGCCTTCT 
GCTCGTGGTG ACACTTCAGG CAAAGTAATG AAGCCAGCTA CCATTACCGG TGGTGGTACT 
GTTACCGTCG CTGATTTTGT TAAAGTGGGT GACAAGATTG AAATTGATAC TCGTACAGGC 
GAGTTCAAGA AGCGCGTTTA A
 
Protein sequence
MKTAHEIRPG NVIMLDGSPW VVQKTETTRS GRNAAIVKLK LKNVLLDSGT EQTFKGEDKL 
DDIILERLDC TYSYFADPMY VFMDEEYNQY DVEADNLGDA ADYIIDGMED VCQVTFYEGK 
AISVELPVHI VREVIYTEPS ARGDTSGKVM KPATITGGGT VTVADFVKVG DKIEIDTRTG 
EFKKRV