Gene Sfri_1877 details

Gene Information

• Locus tag: Sfri_1877
• ID: 4278336
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2220000
• End bp: 2220668
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638134659
• Product: radical activating enzyme
• Protein accession: YP_750562
• Protein GI: 114563049
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0602] Organic radical activating enzymes

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.460246
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATATC CCGTTAACGA AGTATTTGAA ACAATACAAG GTGAGGGCAC ATATACTGGT 
GTTCCTGCAC TGTTCGTTCG CTTGCAGGGC TGTCCTGTAG GTTGTGCATG GTGTGATACA 
AAGCAAACCT GGGATGTGTT ACCCGAAAAC AAAGTGACCG CAGAGCAAGT GATTCAGGTC 
GACGGCACCA TCGGCAGATG GGCTGATCAT ACAGGCTATA CGTTACTGCA AGCATTTCAT 
GATAAAGGCT TTACTGCTAA GCACATTGTG TTAACCGGTG GTGAGCCATG TTTGTACAAT 
TTGACAGAAT TAACCACGAT TTTTATTGAG GCTGGTTATC AGGTACAAAT AGAAACCAGT 
GGCACGTTTG ACGTAAAATG TCATTCAGAT GTGTGGGTTA CTGTATCACC TAAAATCAAT 
ATGAAAGGTG GCTACAAGGT ACTAGAACAA GCATTAAATC GTGCTAATGA AATTAAACAT 
CCTATCGCCA CAGAACACCA TATTGATGAA TTAGATAAAT TATTACTGAA TATTGATGTC 
AGCGATAAAA CCATTTGCTT ACAACCTATT AGCCAAAAGG CGCGAGCAAC AGAACTTGCC 
ATGAAGGTGT GTATTAGCCG TAACTGGCGT TTATCGATAC AAACACATAA GTATCTGAAT 
ATTGACTAA 

 

Protein sequence

MKYPVNEVFE TIQGEGTYTG VPALFVRLQG CPVGCAWCDT KQTWDVLPEN KVTAEQVIQV 
DGTIGRWADH TGYTLLQAFH DKGFTAKHIV LTGGEPCLYN LTELTTIFIE AGYQVQIETS 
GTFDVKCHSD VWVTVSPKIN MKGGYKVLEQ ALNRANEIKH PIATEHHIDE LDKLLLNIDV 
SDKTICLQPI SQKARATELA MKVCISRNWR LSIQTHKYLN ID