| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1869 |
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| Symbol | fadE |
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| ID | 4278328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2211665 |
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| End bp | 2214112 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134651 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_750554 |
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| Protein GI | 114563041 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.203796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCACCC TACTTTGGAT CATCGCGATG ATCTTTGTGC TCGGCGCCAT GGCATACCTG
CGGGTATCGT TATTATCTAC AACAATTGCT GCGGCGATTG TGTTAGTTGT CGGTAGCACT
TTGGACATTA TTGGTGTAAT TACATGGATT GTTTTCCTTG TCATTGCGCT GCCACTAAAC
ATCAAATCAT TCAGACAGAA TTTTATCAGT CGTCCGCTGA TAAAAGTGTA TCGCGGTATC
ATGCCTGAAA TGTCTTCTAC TGAAAAAGAA GCCATTGAAG CAGGTACAAC GTGGTGGGAA
GCAGATTTAT TTGCCGGTAA CCCTAACTGG AGCAAATTAC ATAACTATCC TAAAGCGCGT
TTAACCGCAG ACGAGCAAGC ATTCATAGAC GGACCCGTTG AAGAAGTGTG TAAAATGCTT
AATCAACATG AAGTATCGCA TGTGCTAGGT GACTTGCCAC AAGATGTATG GCAGTTCTTA
AAGGATCATG GTTTCTTCGC GATGATCATT AAGAAAAAGT ACGGCGGGCT TGAATATTCA
GCTTATGCTC AATCTTGTGT ATTACAAAAA CTTGCTGGTG TAAGTAGCGA ACTTGCCTCA
ACAGTAGGTG TTCCTAACTC GTTAGGCCCT GGTGAGTTAT TACAGCACTA TGGTACTAAA
GAGCAGCAAG ATCATTACCT ACCTCGTTTA GCTCAAGGTT TAGAAGTGCC ATGTTTTGCA
CTTACTAGCC CTGAAGCAGG TAGTGATGCT GGCTCAATCC CAGATTTCGG CGTTGTATGT
AAAGGTGAAT TCCAAGGCGA AGAAGTGCTT GGTATGAAAC TTACCTGGAA CAAGCGCTAC
ATTACCTTAG CACCTGTTGC TACCGTACTT GGGCTTGCGT TTAAACTACG CGACCCTGAT
CACCTACTAG GTGATAAAGA AGAATTAGGC ATTACTTGTG CGCTTATTCC TACTGACATT
CCTGGTGTTG AAACTGGACG TCGTCATTTC CCATTGAACT GTATGTTCCA AAATGGTCCA
ACACGCGGTA ACGAAGTGTT TGTACCATTA AGCTTCATCA TTGGTGGTCC AGAAATGGCT
GGTCAAGGTT GGAGAATGTT GGTTGAGTGT CTATCTGTAG GTCGTGGTAT TACCTTACCT
TCAAACTCAG CTGGTGGCGT TAAAACTGCC GCTGTTGCAA CCGGTGCTTA TGCACGTATT
CGTCGTCAAT TTAAATTACC TATCGGTAAG TTAGAAGGCA TCGAAGAGCC AATGGCGCGT
TTAGGCGGTA ATGCTTATCT AATGGATGCA GTGGCAACAT TAACCACTAC CGCTATCGAT
TTAGGTGAAA AGCCATCGGT TGTTTCAGCC ATCGTTAAAT TCCACTTAAC CGACAGAATG
CAAAAGTGTG TTATTGATGC AATGGACATT CACGGCGGTA AAGGTGTGTG TTTAGGGCCG
AATAACTACT TAGGTCGTGG CTATCAAGCT GCACCGATTG CGATTACTGT AGAAGGTGCA
AACATTCTAA CTCGCTCAAT GATCATTTAT GGACAAGGCG CAATTCGCTG TCATCCATAT
GTATTGGCCG AAATGGAATC TGCTTTTGAT ACTGACGCAA ATCGTGGTTT AGCTAACTTT
GACGCGGCTA TCTTTGGCCA TATTGGCTTT GCAACGTCTA ACTTTATTCG TAGCTTCTGG
ATGGGCTTAA CCTCATCTCG TTTCTCGAAT AGCCCTTACT CAGATAAAAC CAAGCGTTAC
TACCAACAGA TGAACCGTTT CAGTGCTAAC TTAGCATTAT TATCTGACTT AGCTATGGCA
ACGTTAGGTG GCAACCTTAA ACGTAAAGAA CGTATTTCTG CTCGTTTAGG TGACTTATTA
AGCCAGCTGT ATCTAACTTC AGCAACGCTA AAACGCTATG AAGATGATGG TCGTTTAACT
GAAGATTTAC CTTTAGTTCA ATGGGCTGTT GAAGATTCAT TATACAAGTT ACAAGATTCG
TTAGATGACT TACTGAACAA CTTCCCAATG GGATTAGGCA TTGCACTTCG TGCCGTTATT
TTCCCATTCG GTCGTCCGAT TAAGCGTCCT AGTGATGTAT TAGACCACAA AGTGGCTAAG
ATTATGCAAA CGCCTTGTGC TAGCCGTGAC CGTTTAGGTA AAGGCCAGTT CTGGACTGCA
TCTGAGTTTA ATGCTGTAGG TATCCAAGAA CAAACGTTTA AAGATATCCT TGCCGCAGAG
CCACTGTACG ACAAAGTCTG TAAAGCTGCT GGTAAGCGTC TGCCATTTAT GTGGTTAGAT
AAAGTTGCTG CAGAAGGTAA AGCGCTTGGT GTGTTAAGCG ACAGCGAAAT CGCTTTACTT
GAACGAGCTG AAATTGGCCG CTTAAAATCA ATTAACGTTG ATGATTTCGA TACCGATGAG
CTTCGTGCGC AACTAGCACC TAAAGCTAAG CAAGAAAAAG CAGCCTAG
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| Protein sequence | MTTLLWIIAM IFVLGAMAYL RVSLLSTTIA AAIVLVVGST LDIIGVITWI VFLVIALPLN
IKSFRQNFIS RPLIKVYRGI MPEMSSTEKE AIEAGTTWWE ADLFAGNPNW SKLHNYPKAR
LTADEQAFID GPVEEVCKML NQHEVSHVLG DLPQDVWQFL KDHGFFAMII KKKYGGLEYS
AYAQSCVLQK LAGVSSELAS TVGVPNSLGP GELLQHYGTK EQQDHYLPRL AQGLEVPCFA
LTSPEAGSDA GSIPDFGVVC KGEFQGEEVL GMKLTWNKRY ITLAPVATVL GLAFKLRDPD
HLLGDKEELG ITCALIPTDI PGVETGRRHF PLNCMFQNGP TRGNEVFVPL SFIIGGPEMA
GQGWRMLVEC LSVGRGITLP SNSAGGVKTA AVATGAYARI RRQFKLPIGK LEGIEEPMAR
LGGNAYLMDA VATLTTTAID LGEKPSVVSA IVKFHLTDRM QKCVIDAMDI HGGKGVCLGP
NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD TDANRGLANF
DAAIFGHIGF ATSNFIRSFW MGLTSSRFSN SPYSDKTKRY YQQMNRFSAN LALLSDLAMA
TLGGNLKRKE RISARLGDLL SQLYLTSATL KRYEDDGRLT EDLPLVQWAV EDSLYKLQDS
LDDLLNNFPM GLGIALRAVI FPFGRPIKRP SDVLDHKVAK IMQTPCASRD RLGKGQFWTA
SEFNAVGIQE QTFKDILAAE PLYDKVCKAA GKRLPFMWLD KVAAEGKALG VLSDSEIALL
ERAEIGRLKS INVDDFDTDE LRAQLAPKAK QEKAA
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