| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1861 |
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| Symbol | |
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| ID | 4278321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2200520 |
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| End bp | 2202679 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134644 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_750547 |
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| Protein GI | 114563034 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.182882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAAC ACATTACAGG CATGCTGGCA TTAATCGGTG TGTTATCGCT TTTGTGTCAA
TGGGTTGGTT GGAAATTACG TCTACCAGCA ATTTTACCAC TTTTATTATG TGGTTTACTG
TTAGGGCCAG GATTAGGGAT ATTAGACCCA GATGAAATCT TTGGTGATTT ATTGTTTCCT
ATTATTTCGT TAGGTGTTGC GGTCATCCTG TTTGAAGGTG CGCTGACACT TAACTTTAAA
GAAATTAAAG AACATGGACG AATGGTGACC CACCTTGTCA CCATCGGCGC ATTTATTACC
TGGGCGTGTA TTGCACCAGC AGCGCATTTT TTGCTTGGGT TTGATTGGGC AATTGCCATG
TTATTTGGCG CACTAGTAGT GGTGACAGGG CCAACCGTGA TTGTGCCTAT GTTACGCACG
GTGCAACCAA AATCCAATTT AGCCAGTATA TTGCGCTGGG AAGGCATCGT TATTGATCCC
ATCGGTGCAT TATTAGCGGT ACTAGTATTT GAGTATATCG CCGTTACAGC CGACCCGACC
ACGCACGTAT TGACTGCATT AGGCTTAACC TTAGTGCTTG GTTTTGGTCT AGGTGCTGCA
GGCGGTTACT TAACGGGTTT AGCTATCCGT AAAAACTTAT TCCCACATTA CTTACGTAAC
ACCGCAGTAT TAACCATTAT GTTGGGCATT TTTGTTGGCT CTAACATTTT ACAAGAAGAG
TCTGGCTTGT TAACGGTTAC GGTAATGGGT ATTTGGTTAG CGAACATGCG CGGGGTTGAT
ATTGCCGACA TTTTGGAATT TAAAGAAACC TTAACCGTAC TACTGATTTC AGCGTTGTTT
ATTCTGTTGG CCGCACGCCT TGATTCTGGT GCAATGCTGG ACCTAGGATT TGGTGGTGTA
GGGGTGCTAT TAGTAGCGAT GTTTGTCGCA CGTCCATTAA GCATTTGGAT TTCAGGCTTA
GGCACCAATT TGTCGTCAAA AGATAAGTGG TTTTTAAGTT GGGTTGCGCC ACGCGGTATT
GTTGCAGCAG CCATTTCATC ATTATTTGCC ATTAAACTAG AGTCGGTTGG CTTAGAAGGT
GCCAGTTCGA TTGTACCGTT AGTATTCTTA ATTATTATTG GTACCGTGGT GATTCAAAGC
TTAACGGCCG GTCGTTGGGC TAAGTTTTTA GGTGTGAAAG AGGGCTCTAA TCAAGGGGTG
TTAATCTTTG GTGCGTCTAA ATTCTCACGT GATTTAGCTT CTATTTTAAT CTCGAAAAAT
ATTAAGGTTA TTCTAGCTGA CAACAACTGG GACAGTATTC GCCAAGCGCG CATGGAAAAT
ATTCCGGTGT ACTTTGGTAA CCCGGCGTCA GAGCATGCAT CTAATTTTAT GGATTTAAGT
GGTATTGGCC GAGTGCTTGT GATGTCGCCT TACCGTCAGT TAAACCCGTT GGTGACATTC
CATTTCCAAG ATTTAATGGG CACCGAAAAA GTGTATGGTT TAAACAATGC TGACAGCGCC
AGTGCTCGTC ATCAGTTGTC TGAATCTTAT CTTAAGCGCT TATGTTTGTT TGGTGAGAAC
ATATCTTACG CCAAAATTGC CACCTTAATG GCCAAAGGCG CGGTATTGAA AATCACCAAT
ATAACTGAAA ACTTTACGTA TGATCATTTC AAAAAGCGCT ACGGTGACAC TGCTATGCCA
TTGGTTTACT TAACCAAAGA AGGCAAGGTT AAAGTTATAT CAGGCGTTGA AGCGATTGTG
CTACCTGTGG GCATAGAGTT AATTAGCTTA TTGCCACAAG AAGCGCAAGA CCAAGCGGTT
ATTCAGCGCG CATTAGATGA CGAAGCCGAT CGCCAAGCCA AAATAGTGGC AGAAGCTGAA
GCCAAAGCGG CCGCTGAAGC CAGAGCTGTT CGTGAAGCAG AAGAGGCTGA GCAACGCATC
ATTGAAAAAG CTCGTCGTAA AGAAGAAGAG TTAGCGCAAT TTGAGCAACA AGAAAAAGCC
CGCTTATTAG CTGACGAAGA GGCTGCATTA GTTAAGCAAG AAACTGCTTT GTTAGCCAAA
GAGTTAGCCG CACAAGAGAA GGCTAAACAA GCTGCAAGCG CTACAACTGA GTCGAGTGAT
GCAGAGACTT CAGCCGATGA AGAAAAGCCA CAGCAGCCAA GCGACACTAA AACGGTATAG
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| Protein sequence | MVEHITGMLA LIGVLSLLCQ WVGWKLRLPA ILPLLLCGLL LGPGLGILDP DEIFGDLLFP
IISLGVAVIL FEGALTLNFK EIKEHGRMVT HLVTIGAFIT WACIAPAAHF LLGFDWAIAM
LFGALVVVTG PTVIVPMLRT VQPKSNLASI LRWEGIVIDP IGALLAVLVF EYIAVTADPT
THVLTALGLT LVLGFGLGAA GGYLTGLAIR KNLFPHYLRN TAVLTIMLGI FVGSNILQEE
SGLLTVTVMG IWLANMRGVD IADILEFKET LTVLLISALF ILLAARLDSG AMLDLGFGGV
GVLLVAMFVA RPLSIWISGL GTNLSSKDKW FLSWVAPRGI VAAAISSLFA IKLESVGLEG
ASSIVPLVFL IIIGTVVIQS LTAGRWAKFL GVKEGSNQGV LIFGASKFSR DLASILISKN
IKVILADNNW DSIRQARMEN IPVYFGNPAS EHASNFMDLS GIGRVLVMSP YRQLNPLVTF
HFQDLMGTEK VYGLNNADSA SARHQLSESY LKRLCLFGEN ISYAKIATLM AKGAVLKITN
ITENFTYDHF KKRYGDTAMP LVYLTKEGKV KVISGVEAIV LPVGIELISL LPQEAQDQAV
IQRALDDEAD RQAKIVAEAE AKAAAEARAV REAEEAEQRI IEKARRKEEE LAQFEQQEKA
RLLADEEAAL VKQETALLAK ELAAQEKAKQ AASATTESSD AETSADEEKP QQPSDTKTV
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