Gene Sfri_1844 details

Gene Information

• Locus tag: Sfri_1844
• ID: 4278111
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2177207
• End bp: 2177749
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638134628
• Product: response regulator receiver protein
• Protein accession: YP_750531
• Protein GI: 114563018
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0730516
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAACA AGCTATTGAT TATAGAAGAC GATTTAGCCC TAGCGACCAT TTTAGCTCGC 
CGCCTCGGTA AGCATGGCTT TGAGTGTAAA ACCTGCCATC ACGCCAGCGA CAGTTTATTA 
ATGGCCAGGC AATTTGTGCC AACGCATATC GTGTTAGACA TGAAACTGGC TGAACATAAT 
GGTTTGTCGT TAATTAAACC GTTAAGACAA TTATTACCCA ACGTCCACAT GGTATTGCTC 
ACTGGCTTTG CCAGCATCGC GACTGCGGTA GAAGCCATCC GCCTCGGCGC AGACAATTAC 
CTCGCCAAAC CCGTCGACAC TCAAACCTTA TTAAATGCAT TATTAGTCAC ACCAGACACT 
ACAACGACTT ATGATGATAT TGAAGAACTA CCCCTTAACC CCAAACGGGT CGAATGGGAA 
CACATTCAAC AAGTCCTCGC CACCAACAAT GGTAACGTAT CAGAAACTGC CCGCCAACTG 
GGCATGCACC GCAGAACCTT GCAGCGCAAA TTGCTGAAAA AGCCAACGGC AGATAATCGA 
TAG 

 

Protein sequence

MMNKLLIIED DLALATILAR RLGKHGFECK TCHHASDSLL MARQFVPTHI VLDMKLAEHN 
GLSLIKPLRQ LLPNVHMVLL TGFASIATAV EAIRLGADNY LAKPVDTQTL LNALLVTPDT 
TTTYDDIEEL PLNPKRVEWE HIQQVLATNN GNVSETARQL GMHRRTLQRK LLKKPTADNR