Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1812 |
Symbol | |
ID | 4277451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2137928 |
End bp | 2139133 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638134597 |
Product | hypothetical protein |
Protein accession | YP_750500 |
Protein GI | 114562987 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATGGA ATGCTTTATT ATTGGCTATG CGAGAAATTC GTCGCAATGT TATGCGGTCA TTTCTTACGG TTTTGGGTAT TGTCATTGGC GTAGCGGCGG TGATTATTAT GGTCACTATT GGTGGCGGTG CAACACAACA GGTGACACAG CAAATTTCGA GCCTGGGCAG TAACCTGTTA ATGGTCTCTC CTGGTCAGCG AATGGGAATG GGCCAGCGGT CCTCAGCATC GGCATTTCGT CTCGATGATG CTGAAGCTAT CAGCAGAGAA ATAAGCAACA TCAGCGCAGT TGCTCCCTCC GCATCGCAGA GTGTTACCGT CGTTTTCGGC AATGAGAACT GGAGTACCAG TATTAGCGGT TCAACCAATC AACTTTTTGA AGCCGGAAAC TGGGAATTTA AATCGGGGCG TCAGTTTGTC GAAAGTGAAT TACGAGCAGG CAAGGCTGTT TGCATAATAG GTGAAACCGT TCGCAAGGAA TTGTTTGGGG AACAAAACCC AATTGGACAA AAAATCCGCC TAGAAAAGCT GTCATGTGAA GTCATAGGGC TACTTAATTC CAAGGGGCAG TCAACAATGG GAATGGATCA GGACGATTTG GTGGTGATTC CGTTACGCAC TTTTCAACGA CGACTAGCGG GTAATCAGGA TGTCAGACTG ATCCAAATAT CAGTTAAAGA TGGCGTATCA ACCCAGAAAG TAGAACAAGC TGTGACTGAA TTGCTGCGTG AACGTCGCCA TATATCAGCC AATGAAGATG ATGACTTTTC GGTAATGGAT CTAAAAGAAA TCGCCAATAT GCTAAGTGGT ACAACACGAG TATTAACTAT GCTACTGGGT GCCGTTGCTG CAGTGAGTTT ACTGGTTGGC GGCATTGGCA TTATGAACAT CATGTTGGTG TCGGTCACTG AACGAACACG AGAAATCGGC ATTCGTCTAG CCATTGGCGC ACTTGAACGA GAAGTCCTAT TACAGTTTCT GGTCGAAGCC ATTGTGCTGT CTTCACTCGG CGGAATTGTC GGCATTATAC TGGCATTGGC AGGCTCAGTT GCGCTAGCAA ATTTAATACA AGTTCCGTTT GTATTCAACA TGAGTATTGT GGTGGTATCG TTTCTATTCT CTGCAGCTGT AGGCGTCATC TTTGGGTATT TCCCTGCCCG TAAAGCCGCG CAACTAGATC CAATAGAAGC CCTGCGTCAT GAATAG
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Protein sequence | MLWNALLLAM REIRRNVMRS FLTVLGIVIG VAAVIIMVTI GGGATQQVTQ QISSLGSNLL MVSPGQRMGM GQRSSASAFR LDDAEAISRE ISNISAVAPS ASQSVTVVFG NENWSTSISG STNQLFEAGN WEFKSGRQFV ESELRAGKAV CIIGETVRKE LFGEQNPIGQ KIRLEKLSCE VIGLLNSKGQ STMGMDQDDL VVIPLRTFQR RLAGNQDVRL IQISVKDGVS TQKVEQAVTE LLRERRHISA NEDDDFSVMD LKEIANMLSG TTRVLTMLLG AVAAVSLLVG GIGIMNIMLV SVTERTREIG IRLAIGALER EVLLQFLVEA IVLSSLGGIV GIILALAGSV ALANLIQVPF VFNMSIVVVS FLFSAAVGVI FGYFPARKAA QLDPIEALRH E
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