Gene Sfri_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1807 
Symbol 
ID4277446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2128486 
End bp2130168 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content43% 
IMG OID638134592 
Producthypothetical protein 
Protein accessionYP_750495 
Protein GI114562982 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTGGG AGACGTTAGG TACAGCTCGA GATATCGGCC GACTGAATGA ACTTGCTTCG 
GTCTTAATCC GTTATGGCTT TGGCGATGTA CTGCGAAGAC TTGGACTCGC GAATGTATTC
AATGTCGCTG GTAAGGCTCT GCATTGGAAG CATGCTGCCG AAATCACTCA GTTAGAATCT
CCGGTCAGAT TTTGTCATGC ATTAGCTGAA ATGGGGCCAA CCTTTATCAA ACTAGGACAG
ATCCTTGCTA CGCGTTCAGA TCTATTTCCA CCAGAGTGGA CTGTAGAGTT TGCAAAATTA
CAAAATCATG CACCGCCGGT ATCATTTGAA TTGATCTGTA AACAATTACA CGAAGACTTA
GGATGTAGTC CGCAACAGGC TTTTGCCGAA TTTAATCCAA CTCCTTTTGC TGCCGCATCG
ATTGCCCAAG TTCATCGAGC TCGTCTACAT GATGGCGCTG AAGTGATTAT TAAGGTTCGC
CGGCCAGGCA TAATGCCCGT TATCGAAGCC GATTTACGTT TACTTGCCCG TATTGCCGAG
GTGATGGAGT CAGAGTCACC GACATTGCGC CGTTTTAGAC CTCGTGAGGT AGTACGCCAA
TTTACCCATT CTCTAAGGCG GGAATTGGAT TTACTGGCTG AATGTCGCAA TGCTGAAAGG
GTGGCTAAAA ATTTCAAAAG TAATCCTAAC ATCATTATTC CTAAAGTGTA TTGGTCGTGG
TGCAGTGAAC GCGTCAATGT TCAAGAGTTT ATTGATGGTA TTGCTGGGCG AAATGTAGAA
GCCGTGGAAG ATGCAGGATT AGATAGAAAA CTGTTAGCCA AGTATGGCGG TCAAGCTGCG
TTGAAAATGA TTTTGATTGA TGGTTTTTAT CATGCAGATC CCCATCAAGG TAATATTTTT
TATATGCCTG AAAATCGAAT CGCATTCATT GATTTTGGTA TGGTTGGACG ACTGTCTTTT
GAACGTCGAC ATCAAGTGGT AACGCTTTTA CATAGCATGG TTGATTTGGA TGCACCTCGC
GTTATTGATG TATTATTGAC TTGGGCTGGC GATCCTCCGC TCAATTGTGA AAATCTTACT
TTTGAAGTTG AAGAGTTTGT TGATAAGTAT CATGGCGTTT CGTTAAAAAA TTTCCATTTG
AGCATGATGT TGACTGAACT GATATCACTG CTTAGAGAAT ATGGTCTTAG CTTACCCCCT
GATATTATTA TATTGATCAA AGCATTGATT GCGCTTGAAG GTGTGGCCCT GCAGTTAGAT
CCTGACTTTA ATATGGTGTC TGAAGCGAAA CCATTATTAC ACCAGCTAAT GTTACAACGA
TATGCACCAG ACGCATTGGC CAAAAGAGGT TGGCAAGCCA TTGTCGATAC CGGTGAATTG
TTAAGTGGAT TACCGCAAGA CTTACAACAA CTTTTACGCT CAGCGCGCAG CGGTAGATTT
CAGTTACATG TTGATGTAAC GAGATTAAAA GCCTTTGGCA ATCAACTTGA CCGGGCAGCG
AGTCGAGTGG CAATTGGTAA TGTGGTAGCG GCTATGATTA TTGGATCTTC TATCGTGATG
ACTGTTGATG GTGGGCCAAC ATTATTTGGT TTGCCGTTAT TCGGCATACT TGGATTTCTG
AGTGCTGCCG TCGGTGGAAT TTGGTTATTA TTCTCAATTT GGTCAAGCGG GCGCTGGAAG
TAG
 
Protein sequence
MLWETLGTAR DIGRLNELAS VLIRYGFGDV LRRLGLANVF NVAGKALHWK HAAEITQLES 
PVRFCHALAE MGPTFIKLGQ ILATRSDLFP PEWTVEFAKL QNHAPPVSFE LICKQLHEDL
GCSPQQAFAE FNPTPFAAAS IAQVHRARLH DGAEVIIKVR RPGIMPVIEA DLRLLARIAE
VMESESPTLR RFRPREVVRQ FTHSLRRELD LLAECRNAER VAKNFKSNPN IIIPKVYWSW
CSERVNVQEF IDGIAGRNVE AVEDAGLDRK LLAKYGGQAA LKMILIDGFY HADPHQGNIF
YMPENRIAFI DFGMVGRLSF ERRHQVVTLL HSMVDLDAPR VIDVLLTWAG DPPLNCENLT
FEVEEFVDKY HGVSLKNFHL SMMLTELISL LREYGLSLPP DIIILIKALI ALEGVALQLD
PDFNMVSEAK PLLHQLMLQR YAPDALAKRG WQAIVDTGEL LSGLPQDLQQ LLRSARSGRF
QLHVDVTRLK AFGNQLDRAA SRVAIGNVVA AMIIGSSIVM TVDGGPTLFG LPLFGILGFL
SAAVGGIWLL FSIWSSGRWK