| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1803 |
|---|
| Symbol | |
|---|
| ID | 4277442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2124488 |
|---|
| End bp | 2124877 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638134587 |
|---|
| Product | DsrE family protein |
|---|
| Protein accession | YP_750491 |
|---|
| Protein GI | 114562978 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction |
|---|
| TIGRFAM ID | [TIGR03012] sulfur relay protein TusD/DsrE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.334392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAT TCATCATTCA AGTAAACGGC AGCGTTTATG GCTCTACAGC CAGTTTTCGC
GCGTTATCAT TTTGCCAAAG CGCATTAGCT AATGGCCATC AAATTATCAA CGTCTTTTTC
TATCAAGATG GCGTAACCAA TAGTAATGCT CTCACCTGTC CTGCATCTGA CGAAATTGAT
ATGCATTCCA ATTGGCAATC ATTGTCATCA GAACATTCAA TATCGCTAAC CAATTGTGTG
TCTGCTGCGC TGCGTCGTGG TGTGTTATCA CCACAAGATG CTACAGAGAA TGGTAAACTA
CAATGGAATA GCAGTGACGC CTTTACCATG GGCGGTTTGG GTGAATTAGT GGTCGGTATT
GAACAAGCTG ACAGGTTGAT TAGCTTTTAA
|
|---|
| Protein sequence | MSKFIIQVNG SVYGSTASFR ALSFCQSALA NGHQIINVFF YQDGVTNSNA LTCPASDEID
MHSNWQSLSS EHSISLTNCV SAALRRGVLS PQDATENGKL QWNSSDAFTM GGLGELVVGI
EQADRLISF
|
|---|
| |