Gene Sfri_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1802 
Symbol 
ID4277441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2124112 
End bp2124468 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content44% 
IMG OID638134586 
ProductDsrE family protein 
Protein accessionYP_750490 
Protein GI114562977 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2923] Uncharacterized protein involved in the oxidation of intracellular sulfur 
TIGRFAM ID[TIGR03010] sulfur relay protein TusC/DsrF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.223353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAC TGGCAATTAT GTTTAGGCAT GCACCATTAG GTACCACCAG TACCCGCGAA 
GGGCTGGATT TTGCCATGCT CAGTGCCAGC TTTGAACAAC AAGTGAGTAT TATATTTACC 
AATGAAGCGG TATTACATTT ACTGGCAGGC CAAACACCTG AGCAAGCAGG ATCTAAAGAT 
TATGTAGCGG CATTTAAAGC GCTTTCTCTT TACGATATTG ATACCGTGTT GGTGTGTGCA 
GAGTCAATGC ACACTTTAGG ATTACAGCCT AATGACCTTA GTATTACAGC GACGGTGGCG 
ACTCCAGAGG TTATTACTCA AACCCTGCAA GCCGCTGATG AGGTGTTAGT ATTTTGA
 
Protein sequence
MKSLAIMFRH APLGTTSTRE GLDFAMLSAS FEQQVSIIFT NEAVLHLLAG QTPEQAGSKD 
YVAAFKALSL YDIDTVLVCA ESMHTLGLQP NDLSITATVA TPEVITQTLQ AADEVLVF