| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1799 |
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| Symbol | |
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| ID | 4277438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2121704 |
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| End bp | 2122990 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134583 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_750487 |
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| Protein GI | 114562974 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0591455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGATC CAAAATTTTT GCGTAATGAA CTGGAAATTA CTGCCGAGCG TTTAGCCACT
CGTGGCTTTA TTCTTGATGT CGATAATTTG ACCAAACTTG AAGAAAAGCG TAAATCGCTA
CAAGTTGCTA CAGAAGACTT GCAAGCATCG CGTAACGCGA TCTCTAAGTC GATTGGTCAA
GCTAAAGCAC GCGGCGAAGA TACCAGTTCC ATTATGGCGC AAGTGGGTGA TTTAGGTGCA
CAGCTAGATT CAAAGAAAGC AGAGCTTGCT GAGTTGTTGC AACAGATCAA TAGCATCGCC
ATGAGCGTGC CAAATTTGCC AGACGAATCG GCTCCCGTAG GTGCTGATGA AAACGACAAT
GTTGAAGTAC GTCGTTGGGG CACCCCAAAA GTATTCGACT TTGAAGTGAA AGATCATATT
GACTTAGGTG AAGCATTAGA AGGACTAGAT TTTAAAAACG CGGTTAAAAT TTCCGGCTCA
CGTTTTATTA TCATGCGTGG TCAAATTGCT CGCTTAAATC GTGCGTTAGG TCAGTTTATG
TTAGACTTAC ATACCACTGA ACATGGCTAT ACAGAAACAT ACGTACCGTT ATTGGTTAAC
GAAGAAAGCT TATTAGGCAC AGGTCAATTA CCTAAGTTTG GTGAAGATTT ATTCCACACT
AAACCGGCCA CCGAAGAAGG CCAAGGTTTA TCACTTATTC CAACTGCAGA AGTGCCATTA
ACTAACTATG TGCGCGATAT GATTGTGGAT GAAACTGAAC TTCCGATGAA AATGACGGCG
TTAACGCCAT GTTTCCGCAG TGAAGCGGGC TCTTATGGTC GTGATACTCG TGGTGTGATC
CGTCTACATC AATTCGACAA AGTAGAATTA GTGCAAATTG CTCATCCAGA TCATTCAATG
CAAGCATTGG AAGACATTAC CTCGCACGCT GAAAAAGTAT TACAGTTACT TAACTTACCG
TACCGCACTA TGGTGCTATG TACTGGTGAT ATGGGCTTTG GATCAAGTAA AACCTTTGAT
ATAGAAGTGT GGTTACCTGC GCAAAATACT TACCGAGAAA TTTCATCTTG TTCAAACATG
AAAGATTTCC AGGCGCGTAG AATGCAAGCT AGATACCGTA GCAAAGCAGA TAACAAACCT
GCTTTATTGC ACACCTTAAA TGGTTCAGGT TTAGCGGTTG GCCGTACGTT AGTAGCCGTA
ATTGAAAACT ATCAAAATCA AGATGGCACC ATCACAGTAC CTGAAGCTTT ACGTCCATAC
ATGGGCGGTT TAAGCCTGAT TGGTTAA
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| Protein sequence | MLDPKFLRNE LEITAERLAT RGFILDVDNL TKLEEKRKSL QVATEDLQAS RNAISKSIGQ
AKARGEDTSS IMAQVGDLGA QLDSKKAELA ELLQQINSIA MSVPNLPDES APVGADENDN
VEVRRWGTPK VFDFEVKDHI DLGEALEGLD FKNAVKISGS RFIIMRGQIA RLNRALGQFM
LDLHTTEHGY TETYVPLLVN EESLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL
TNYVRDMIVD ETELPMKMTA LTPCFRSEAG SYGRDTRGVI RLHQFDKVEL VQIAHPDHSM
QALEDITSHA EKVLQLLNLP YRTMVLCTGD MGFGSSKTFD IEVWLPAQNT YREISSCSNM
KDFQARRMQA RYRSKADNKP ALLHTLNGSG LAVGRTLVAV IENYQNQDGT ITVPEALRPY
MGGLSLIG
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