| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1755 |
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| Symbol | |
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| ID | 4277534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2063553 |
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| End bp | 2065022 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134539 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_750443 |
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| Protein GI | 114562930 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTAAAT TATCATTATC GACCTTTTCA AAATCACTGG CTGCTAGCGC TATTAGTGTG
CTTTTTGCTG CCAGTATTGG CCACAGTTTT GCCAATAATG ATCTTCCAGA TCTAGGTACC
GCAGCGGTCA ATACTTTTAG TTTAGAAAAA GAAACTGTCT ACGGTGACGC TTATATGCGC
GTTATTCGTT CATCGGCACC GGTACTCAGT GATCCAGTGT TAACCCAATA TTTATCTGAA
CTGGGTAACA AGCTAGTTGC TAATGCCACG GGGGTAAAGA CACCATTTTA TTTCTTTTTA
CTCCGCAATG ATGAAATCAA CGCATTTGCG TTCTTTGGTG GTCATGTTGG CGTACATACG
GGTTTATTTT TAAATGCCGA CAACGAAAGT GAGCTTGCAT CAGTATTAGC CCACGAAATT
ACCCACGTGA CTCAACGCCA TCTAGCACGA TCTCTTGAAG CACAACAAAA AAGCTCGACT
GCAACGATTG TGGGAATGTT AGGGGCTATT TTATTAACAA TTGCTGCACC TCAAGCCGGT
ATGGCTGCCT TGGCGACAAC TCAAGCATTA GCAACGCAAT CTAAAATAAA CTATACCCGC
TTACATGAAA AAGAAGCTGA TCGTATTGGA ATGCAAATTC TTGTCGATGC TGGATTTGAT
CCTAATGCTG CTGCTACATT TTTTGGTCAA TTAGCAATTC GCTATCGTTT TACCACAACA
CCACCACAAA TGTTGCTGAC GCATCCATTG CCAGAATCAC GTATTACTGA GGCTCGTAAC
CGCGCAGCTC AGTACCCTAA ACGTAATGTC CCTAACAGCC TTAACTTTCA GCTAGCTAAA
GCCCGTATCC AAGTTCGCTT TTCAAGTTTT AGTGATGATG CCGCGTTATC TTTGTTTGAA
CAACAACTCA AAAAGAATGA GTATTCTTTT AAACAAGCGG CACTCTATGG CAAAGCGTTA
GCACTTTTCC GTTTGGAAAA ATTTGCTCAA GCTGAAGTGA TCATCGATGA TCTACTAAAA
CAAGATGACA ATAATCTGTT CTACATCGAC ACCAAAACAG ATTTGTTAGA TCAGAAAAAA
GATTTTGCAG GCGCAATAGC ATTATTAGAA GCTCAGCGGA AATTGAAACC GACTTCGCAA
GTGGTCAACA CAAACTTGGC CAATATTTAT GTTCAGGCAG ATCAACCGAA AAAAGCGATT
CCACTTTTAG AAGAACTGAT ATTTTTCGAT AAGCAAAATA TGCTGCCGTA TCAAATTATG
GCTGATGCAT ATCGTAAGCT AGACAATAAG GCGCTTGAGT ATTATAGCAA TGCTGAACTC
ATGGCCTTAT CGGCTAACTA TAAAGGTGCT ATTGACCAAC TCAATTATGC ATATCGCTAT
TCTGATGGAC AAAACCTGCA ACTGGCGCGA ATTGAGGCAA GAATAAGACA ATTCAGACAA
GCAGATAGGG CAATGGAAGA ATTAAAATAG
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| Protein sequence | MSKLSLSTFS KSLAASAISV LFAASIGHSF ANNDLPDLGT AAVNTFSLEK ETVYGDAYMR
VIRSSAPVLS DPVLTQYLSE LGNKLVANAT GVKTPFYFFL LRNDEINAFA FFGGHVGVHT
GLFLNADNES ELASVLAHEI THVTQRHLAR SLEAQQKSST ATIVGMLGAI LLTIAAPQAG
MAALATTQAL ATQSKINYTR LHEKEADRIG MQILVDAGFD PNAAATFFGQ LAIRYRFTTT
PPQMLLTHPL PESRITEARN RAAQYPKRNV PNSLNFQLAK ARIQVRFSSF SDDAALSLFE
QQLKKNEYSF KQAALYGKAL ALFRLEKFAQ AEVIIDDLLK QDDNNLFYID TKTDLLDQKK
DFAGAIALLE AQRKLKPTSQ VVNTNLANIY VQADQPKKAI PLLEELIFFD KQNMLPYQIM
ADAYRKLDNK ALEYYSNAEL MALSANYKGA IDQLNYAYRY SDGQNLQLAR IEARIRQFRQ
ADRAMEELK
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