| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1719 |
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| Symbol | hisD |
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| ID | 4277498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2026019 |
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| End bp | 2027308 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134503 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_750407 |
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| Protein GI | 114562894 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATTC TCGATTGGGC TTCTTTATCT ACCGAACAAC AACGACAAAC GTTAGCGCGC
TCGCCATTAA TTGGTGATAC AAGTGTAGAA CAACGTGTTC GTAACATTAT TGAGCAAGTG
AACGCTCAAG GTGATAGCGC GTTACTGGCT TATAACAAGC AATTTGACGG TGTTGAACTG
ACTCAACTAG CGTTATCAAC TGACGAGATT GCTGCAGCAT GTGCACGAGT AGGTGACGAC
GTCAAACAAG CTGTTGCGCA AGCGGTGAAT AACATTGAAA CCTTTCATAA GGCGCAAGTG
TTTCAGGGTG TTGATATAGA AACTCAAGCG GGAATTCGTT GTGAATTGCG CAGCGAACCC
ATCGAGCGAG TCGGCTTATA TATTCCCGGT GGTACTGCGC CATTAATATC CACTGTGATG
ATGTTGGCGT TACCAGCAAG AATAGCCGGT TGCGAAAAGC GTGTATTAGT CAGTCCACCG
CCGATTAATG ATGCGATTAT TTATGCTGCT AATGTATGCG GTATTACAGA CATCTTTCAG
GTCGGTGGTG CCCAAGCTAT TGCAGCATTA GCATTTGGGA CAGAATCGGT GCCAAACGTA
GACAAAATAT TCGGTCCGGG TAATCGTTAT GTGACTGAAG CAAAACGATT AGTGTCACAG
GACAGCCGTA TTAGTGTGTC AATAGACATG CCTGCAGGTC CGTCTGAAGT ACTCGTTATT
GCCGACAAAG ATGCAAATCC TGGTTTTGTT GCTGCCGATT TATTATCCCA AGCAGAACAC
GGCGTTGACT CGCAAGTAAT GTTAGTTACC GACTCATTAA CACTGGCAGA GCAAGTCAAC
CAAGCCTTAA TAGAACAATT AGCGCAGTTG AACCGTAAAG ACATCGCCGC ACAAGCGCTA
GAATGTAGCC GAAGTATTAT TGTTAGCGAT ATGGCTCAAG CAGCAAAAGT GTCAAACTTG
TATGGCCCAG AACATTTGAT TATTCAAACT GCGGCACCTC GAGACGTATT AAAGCAAATT
CGCGGTGCGG GTTCAGTGTT CTTAGGGGCT TATACCCCTG AGTCTGTAGG CGATTATGCT
AGCGGTACTA ACCATGTATT GCCGACTTAT GGTTATAGCC GCTCGGTTTC AAGTTTGTCA
TTAGCCGACT TTAGTCGCCG TTTTACGGTG CAAGAGCTTA ACCAACAAGG GCTTAAAACC
TTAGGTAACA CCGTCATGGT GTTGGCAGAA AATGAATTAT TAGGTGCGCA TAAAAATGCT
ATCGCCATTC GCTTAGCCAG TTTTGAGTAG
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| Protein sequence | MQILDWASLS TEQQRQTLAR SPLIGDTSVE QRVRNIIEQV NAQGDSALLA YNKQFDGVEL
TQLALSTDEI AAACARVGDD VKQAVAQAVN NIETFHKAQV FQGVDIETQA GIRCELRSEP
IERVGLYIPG GTAPLISTVM MLALPARIAG CEKRVLVSPP PINDAIIYAA NVCGITDIFQ
VGGAQAIAAL AFGTESVPNV DKIFGPGNRY VTEAKRLVSQ DSRISVSIDM PAGPSEVLVI
ADKDANPGFV AADLLSQAEH GVDSQVMLVT DSLTLAEQVN QALIEQLAQL NRKDIAAQAL
ECSRSIIVSD MAQAAKVSNL YGPEHLIIQT AAPRDVLKQI RGAGSVFLGA YTPESVGDYA
SGTNHVLPTY GYSRSVSSLS LADFSRRFTV QELNQQGLKT LGNTVMVLAE NELLGAHKNA
IAIRLASFE
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