Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1709 |
Symbol | pheT |
ID | 4277734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2015984 |
End bp | 2018371 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638134493 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_750397 |
Protein GI | 114562884 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.739174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCA GTGAATCTTG GCTTCGTGAG TGGGTTAACC CATCAGTAAG TCGTGACGCA TTATCACACC AAATCACCAT GGCCGGTCTT GAAGTTGATG GTATCGATGC CGTAGCTGCT GATTTTAGCG GTGTTATTAT TGGTGAAGTG GTTGAATGTG GCCAACACCC AGATGCAGAC AAATTACGCG TCACCAAAAT CAATGTTGGC GGCGATGAGC TTATCGACAT TGTTTGTGGT GCACCAAACT GTCGTTTAGG CTTAAAAGTG GCTGTAGCAA TGGTTGGCGC TGTGTTACCT GGCGATTTTA AAATTAAAAA AGCCAAGTTG CGCGGTCAAC CGTCAATGGG CATGTTGTGC TCGTATGGCG AGTTAGGTAT CGACATCGAA AGCGATGGCA TTATTGAGCT ACCGACTGAT GCACCAATCG GTGTCAATGT ACGTGAATTC TTGCAATTAG ATGACGCCAT TATTGATGTT GATTTAACGG CTAACCGCGC TGATTGTTTA GGCATGGCAG GGCTTGCACG TGAAGTGGGT GTATTAAATC GCCAAGCAGT GACAGAACCT TCTTGGGACG CGGTAACTGC CACGATTGAC GCGCCATTTA GCATTAATGT TGTTGCACCA GATTTGTGCC CACGTTACTT AGGCCGTGTG GTTAAAAACA TCAATGTTAA GGCTTCTACA CCATTATGGA TGCAAGAAAA ATTGCGTCGC AGTGGTATTC GCTCAATTGA TCCAATCGTT GATATCACCA ACTATGTATT GATCGAATTT GGTCAGCCAA TGCATGCGTT TGATTTAAAT ACCTTAAGCG GCGGTATTAC CGTACGTTTA GCTGATGGTG TTGAAAAGCT AACCTTACTT GACGGCAACG AAATTACCGT TCCTAGCGAT ACCTTAGTGA TTGCAGACGA CAAACAAGCG GTAGCGCTTG CGGGTGTGTT TGGCGGCGAA AGTACTGGTG TGAATGAAAA CACTCAAGAC ATTCTTTTAG AGTGCGCCTT CTTTGCACCG TTAGCCATTA TGGGTAAATC TCGTCGTTTA GGCTTACACA CAGACGCGTC ACACCGTTTT GAGCGTGGTG TAGACCCTGA GCTGCAACAT AAGGTCATGG ACCGCGCTAC TCGCCTTGTA TTGGATATCT GTGGTGGTGA AGCAGGGCAA GTGATTGAAG CGGTGTCTGC TGAGCATTTA CCAACAGCGG CTAAAATAAC TCTGCGTCGT AGCAAGTTAG ATAAAACCTT AGGTCACTTT ATTCCTGACT CTGACGTGGT TGAAATTCTA GAACGTTTAG GTTTTAGCGT GCAAACCAGC GGTGATGTAT GGAATGTGAC AACCGCGACT TATCGTTTTG ATATGGCGAT TGAAGAAGAT TTAATCGAAG AAGTTGCCCG TATTTACGGT TACAACAACA TTCCTAATAC CGCACCAAAA GCGGCGTTAA GCATGCCAGA TCACAAAGAA GCGGATATTT CGTTAAAACG TGTGCGCAGT ATCTTTGTGG CTCGAGGTTT CCAAGAAGCG GTTACCTACA GCTTTGTCGA CCCGAAGATG CAGAACATTG TTCATCCTGG CGAAGAAGCG ATGGTGTTGC CTAACCCGAT TTCTGTCGAA ATGTCAGCAA TGCGCTTATC AATGTTTACT GGTTTATTGA CCGCAGTAGG CTATAACCAG AGCCGCCAGC AAAATAGAGT ACGTTTATTT GAGACAGGTT TACGCTTTGT TCCTGATGCA CAAGCAGATT CTGGTGTTCG TCAACAAGCT ATGCTGGGCG CGGTTATTTC TGGTGCTCAA AACGAAGAAC ATTGGTCAAT GGAATCGAAA ACAGTCGACT TCTTTGATTT AAAAGGTGAT TTAGAAGCAA TAATCGGCTT GACAGTTGCC TCTACAGAAT TTAGCTTTAG AGGGGCAACA CATCCTGCGC TGCATCCAGG TCAATGTGCT GAAATATTAC GAAATAATCG AGTCATTGGT TACATCGGTG CTATCCATCC TAGTTTGGAA AAGCCGTTTG GACTCAATGG AAAAACAATT GTTTTTGAGT TAGAACTGGA TGCATTATTG CACGCCCGTT TGCCGCTAGC CCAAGCTGTG TCTAAGTTTC CTGCCAATCG CCGCGACATC GCGGTAGTAG TAGATGAAAC AGTTTCTGCA ACTGATGTTA TGAATTTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CTTAAACTTG TTCGATGTAT ACCAAGGTAA AGGTGTTGAG CCAGGCAAAA AGAGCCTAGC CATCGCACTT ACGTTACAAG ACACTACTCG TACACTTGAA GATAAAGATA TTACTGAGAC TATGGAATCA GTGGTATCGG CTCTAAAGAC CGAGTTCAAC GCATCGTTGA GGGATTAA
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Protein sequence | MKFSESWLRE WVNPSVSRDA LSHQITMAGL EVDGIDAVAA DFSGVIIGEV VECGQHPDAD KLRVTKINVG GDELIDIVCG APNCRLGLKV AVAMVGAVLP GDFKIKKAKL RGQPSMGMLC SYGELGIDIE SDGIIELPTD APIGVNVREF LQLDDAIIDV DLTANRADCL GMAGLAREVG VLNRQAVTEP SWDAVTATID APFSINVVAP DLCPRYLGRV VKNINVKAST PLWMQEKLRR SGIRSIDPIV DITNYVLIEF GQPMHAFDLN TLSGGITVRL ADGVEKLTLL DGNEITVPSD TLVIADDKQA VALAGVFGGE STGVNENTQD ILLECAFFAP LAIMGKSRRL GLHTDASHRF ERGVDPELQH KVMDRATRLV LDICGGEAGQ VIEAVSAEHL PTAAKITLRR SKLDKTLGHF IPDSDVVEIL ERLGFSVQTS GDVWNVTTAT YRFDMAIEED LIEEVARIYG YNNIPNTAPK AALSMPDHKE ADISLKRVRS IFVARGFQEA VTYSFVDPKM QNIVHPGEEA MVLPNPISVE MSAMRLSMFT GLLTAVGYNQ SRQQNRVRLF ETGLRFVPDA QADSGVRQQA MLGAVISGAQ NEEHWSMESK TVDFFDLKGD LEAIIGLTVA STEFSFRGAT HPALHPGQCA EILRNNRVIG YIGAIHPSLE KPFGLNGKTI VFELELDALL HARLPLAQAV SKFPANRRDI AVVVDETVSA TDVMNLIRKV GENQLVGLNL FDVYQGKGVE PGKKSLAIAL TLQDTTRTLE DKDITETMES VVSALKTEFN ASLRD
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