Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1653 |
Symbol | |
ID | 4277312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1959953 |
End bp | 1960708 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134438 |
Product | hypothetical protein |
Protein accession | YP_750342 |
Protein GI | 114562829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000671597 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATGG AATTAATGGT TAAGGCTATG AAGGCGAAAG TGGGTAATCC GCTGCGCAAG TTGGTGTTAT TGAAATTGGC GGATAACGCG AACGACCAGG GTGAGTGTTG GCCTAGTTAT AATTACATTG CTGAGCAGTG TGAAATGAGC CGTCGTAGCG TTATGGACCA TGTTAAAAAA CTCGAAAAGT CGGGCTTTTT ACGTCGTGAA TATCGCAAGG GTGTTAAGGG TAATTCGTCT AATGTTTTTC ATCTGGATTT TGATGAAAAT ACAGGGTTAG GTGGTGAATC TGCTGCACTA CCTAGTGAAT CTGTCGCACT ACCCCCTAGT GAATCTGCTG CACTACCTAG TGAATCTGCT GCACTACCCC TAGTGAATCT CCTGCACCCA GAACCAGTCA CTTTAGAACC AGTCAATGAA TCTTTAAAAG ATGTAGTCAC CACATCGAAA AAATCACCTT TGGATTTTTC AAAGTGGCCT GCCTTGCCAA GTGACCAAGT TTTTAAAGAC TGGTTAGCCA TTCGCAAACA GAAAAAAGCC AAGTTAACCC AAACAGCGAT TAATCGCCTG GCACCGCATT TGGTGAAAGC GGTTGCTGCG GGTTGTTCGG TTGATGACGT TTTTGAGTTA TGCGCTTCAC GTTGCTGGAT TGGTTTTGAG TTCGATTGGT TAGTTAACGC TGGCTTGATT GCGAAACAAG CGATTAAGGC CGATTGGAGT CACTCAGTTT TTGACCCAGA GGATCCATTG ATATGA
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Protein sequence | MSMELMVKAM KAKVGNPLRK LVLLKLADNA NDQGECWPSY NYIAEQCEMS RRSVMDHVKK LEKSGFLRRE YRKGVKGNSS NVFHLDFDEN TGLGGESAAL PSESVALPPS ESAALPSESA ALPLVNLLHP EPVTLEPVNE SLKDVVTTSK KSPLDFSKWP ALPSDQVFKD WLAIRKQKKA KLTQTAINRL APHLVKAVAA GCSVDDVFEL CASRCWIGFE FDWLVNAGLI AKQAIKADWS HSVFDPEDPL I
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