Gene Sfri_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1645 
Symbol 
ID4277304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1955140 
End bp1955463 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content48% 
IMG OID638134430 
Producthypothetical protein 
Protein accessionYP_750334 
Protein GI114562821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000102791 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACTGA CAAATACCCC TTCAACAGAC AAACAACGTA CTGAACATTT CCACCTGGTC 
AGTATTCGTT TTGCCTGCCT GCTCACCACC AAACAAGACC CTATGGACTG CGAACGTGTT
GCATTGCGTG TAGCAAAACT TGAACGCCAA TTAATGCACA GCAACCCAAG CCAACTGTTT
AGTAGCCAAT TTGAAAGTCA AGCCGGTGAG CTGGGCGATA ACCTTGCCAT GCGTTACAAC
CACCACACTG GCCGCATCAC CATCTGGCGC AATACCCCAT TACATCAAAG CGGCAAAGTG
TTCCAACTGA GGGCGAATGT ATGA
 
Protein sequence
MILTNTPSTD KQRTEHFHLV SIRFACLLTT KQDPMDCERV ALRVAKLERQ LMHSNPSQLF 
SSQFESQAGE LGDNLAMRYN HHTGRITIWR NTPLHQSGKV FQLRANV