| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1636 |
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| Symbol | |
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| ID | 4277295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1946093 |
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| End bp | 1949269 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134421 |
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| Product | hypothetical protein |
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| Protein accession | YP_750325 |
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| Protein GI | 114562812 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0361894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCATAT CGACCCTTAA CAAGATTTTG CTCTTTGTTC TGTTTTGTAC GGTAGCGTTA
GTGTGGGCCA TTATCGAAAA TGCCAAACCT CTTACGGTCA AAATACTCAA CAACTTATTG
GCCGACAACC ACATAGAAGT GCTTAATTTT GATGCCGAAT ATGTCTCATT TAATCATATT
CGGATCCCCA GATTAGTCTT AAAAATTGAA GACAGTCATA TTGCCATCCA AGAGTTTAAT
CTTGAGCTAC GCGACAGCCT GCAAATTCTT AAAAACCAAC AAATCAACGC CGACGATATC
GTTAGTATCA AAACCCAAAG TGTGTACGTT GATTTAGGTG ACAGTTTTTT CATTCGTCAA
TCACAACAAA CTGAAGAATC ACCAGCGGCG ATGCAACTCA ACCTCGCAAA ATTACCTACG
ATTGAGTTAG GTGAAATTAA CATTAAGCTG CCAGTGCTGG ATAAAGATCT CCCACAGCAA
CACACTTTAA AGATGGACAA GCTTACCTTG ACCCAAAAAG GTCAACTAAA TACCTTGTGG
CGCTTTAATG ATTTCCCGCT ATTTAGCCTA GATGCCACCT TAGACAAGCG TGCCTGGCAA
TTTAACACCC TAGTTGATTT AGGGCTAAGC TATCAAGGAC TTAATTCGTT AGAACAGTAT
TTAAACTTAT TAAACAATAA GCAGCAATCA CAACAAGTGC AAAGCAATAA TATGCTTTAT
GGCTTGCATA AGCAGCTATT ACAACTTCTA CAACCTATTC GTCAACAACA AGTCACCATC
GAAGGCCAAT GGACGGCCAA TAGTAAAATT AACTTAATCA GCGGCGAGAT GAGCAGCCAG
CAATCAATAG ACGGTTTATC TTTGCACTCA CCACTGTGGC CCAGTGTTTA TTTTTCGCCG
CAACAACCTG TTAAAGCAAT GCTGAATTTG GGCTATTACC CTGTAACGGC TTCACTAGAC
AACAGTAAAA CCACTGATGC CTTCGCAGTA AAATTAGATA TTGCACCGCT AAATTATCAA
CTGTCGCCCT CACAAGACGA CAGAAGTAAA TTAATTGCAT TATTAACTGG TGAGAACGCC
AATCAAATAA TTCATATCAT TGACAAATTA ACCCCTAAAT CGACTTCTCA GCTAGCCAGC
ATCGATGTCG ACATGGCTTA TCCTATTGAA GTCGTTATCC CGCTGCAAAA TGATGATCTA
CCTCTGCAGG TGTCAATTCC TGACCTAAGC GTCAGCATTG AAGGGTTATT GCTCCAAAGC
AAATTAAAGC TGGCGCACAC CACATTCAAT AGTCATCAAC AATTTAGCAG CCACTTCGAT
TGGGGTATGG CATTGTCGAC CCAGGAAGCA ACAGCCAAGA CAGAACAACA GCCAATCAAC
ACACTCGCCG CTGACGATAT AACTGTAACG GCCAGTGAAA ATGTATCCGA ACCAACACCA
GTAACCGCAA TGGCTCCAAG TCTTATCGAT ATTAAAGCCT TATTCCCTGA GATCCCGTTA
GAGCTGTTGT CTTTGTCTGA TGCTAAAGTG AGTCTAATCG GTCAAATATC GCAGTGGCAA
CAACATCAAC TCGAACTATC ATTACTGCCA AACTCCAGCG TAGCTGTCAA CAACACAAGT
ATATTGCGCA GTATTAACAG TGAGAATGAA CAACATATCA AGCAGACCAA AAAAACTTCT
GCACAATTGG GATCATTCGG GCTTGTACTC AATGACACCT CGACCATGTC ATTCAAACAA
AATAATACTC AACTCAATCT ATCTCCGTTT ACGCTGCAAA TTGGCCAAAT GATCGTTCAA
CAAGCTACCC AAGTGGACAA CAGTAAGCTA TCGACTACAC TGGCCTCGGT TAAAAAAGCC
GATATTGCTA TCAATCAAGG CATAACCTTA GCGTTACTTC AGGATGAGCC CATCGACAAG
TCGCTAGAAC GTTGGCTACA AAACCCTGCA ACCAATGACA TCGCTTGGCG AATCAATAAA
CTCGATATCA CCAAGCAACT AGGAAAAAGT CGCCGCCAAC CACTACTTGC ACTGGATAAG
ATTACGGTTA CTCAGCAACT CAATTTATCC AAAGGATTAC TGGTCGGTAG CGAACAATGG
CAACTCGACA CCCTTAACTT AAGCAGTTAT CACTTACTTA AATTTGCCGA TAAAAAAAGC
CCATTATCAT TAGCTGGCCA ATGGACTTTT GATACCGATA TTGAAACAGC AATCAAGACA
TTACAAAAAG TCCAACCCCT GCCAGATAAC TTTACAATTC AAGGCCACAG CAAACTAATC
GCAGGTTTTG CGTTAAGCGA AATAGGCAAC ACCAGTCAGT TTGAAATGAA AATTCAACAA
CAGTTGTCAT CTTTGTCAGG TCAATGGGAA GATAAAACCT TTAACGGTGG TGACGTGTTT
GCCCAATGTC AATTTAACTG GCAGCAAACT CACGATGGCC CTAATACTCC AGCAGCAGAG
AAACACTTTG CCCACAGTCA ATTAGTCTGC CCACAAACCG CAATCAGTTT GCAGCAAGCT
AAGCTTGGTT TATCGCTAAC AAACTTGAAT TTGAATGCCG ATATCGAACT TAACAAAGAC
GGCAATAAAG CACCGGCCAA TTGGTTACAG CAAGTTACAG GGTTAAGCGA GACCAACATC
AACCTTACCG CCAGCGGCGA CATGCTTGAT GGACGCTTTT TATTACCTGA GTTTGTGTTA
AAACTGCATG ATAAATCTTA TGGATACTTA TTATTACAAG GGTTGAGTCT AGAAAAATTC
TTAGAAGAGC AACCGCAAGT GGGTGTAAAA GCCAATGGCT TATTTGATGG CGTATTACCC
GCGGTACTGG TTGATGGCAA AGTGACTGTT ACTGGTGGCA AACTGGCTGC GCGAGCACCT
GGAGGATTAA TTGAAGTTGC CGGAAATCCT GCAATGGATC AGCTAGAATT ATCTCAGCCT
TATCTTGGAT TAGTCTTTAC CGCACTTGAG CATCTTAACT ATACTGAATT GTCGAGCACC
TTTGACATGA TACCCAACGG CGATGCACAG ATTAATATTG CAGTAAAAGG TAACAGCCGT
GACATTGAGC GCCCTGTTCA CCTTAATTAC TCTCACCAAG AAAACTTAAT TCAGTTATAC
AAAAGTACTC AGATCGGTAA TCAGCTACAA AGCAAAATTG AAGCAAAAGT CCAATAG
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| Protein sequence | MRISTLNKIL LFVLFCTVAL VWAIIENAKP LTVKILNNLL ADNHIEVLNF DAEYVSFNHI
RIPRLVLKIE DSHIAIQEFN LELRDSLQIL KNQQINADDI VSIKTQSVYV DLGDSFFIRQ
SQQTEESPAA MQLNLAKLPT IELGEINIKL PVLDKDLPQQ HTLKMDKLTL TQKGQLNTLW
RFNDFPLFSL DATLDKRAWQ FNTLVDLGLS YQGLNSLEQY LNLLNNKQQS QQVQSNNMLY
GLHKQLLQLL QPIRQQQVTI EGQWTANSKI NLISGEMSSQ QSIDGLSLHS PLWPSVYFSP
QQPVKAMLNL GYYPVTASLD NSKTTDAFAV KLDIAPLNYQ LSPSQDDRSK LIALLTGENA
NQIIHIIDKL TPKSTSQLAS IDVDMAYPIE VVIPLQNDDL PLQVSIPDLS VSIEGLLLQS
KLKLAHTTFN SHQQFSSHFD WGMALSTQEA TAKTEQQPIN TLAADDITVT ASENVSEPTP
VTAMAPSLID IKALFPEIPL ELLSLSDAKV SLIGQISQWQ QHQLELSLLP NSSVAVNNTS
ILRSINSENE QHIKQTKKTS AQLGSFGLVL NDTSTMSFKQ NNTQLNLSPF TLQIGQMIVQ
QATQVDNSKL STTLASVKKA DIAINQGITL ALLQDEPIDK SLERWLQNPA TNDIAWRINK
LDITKQLGKS RRQPLLALDK ITVTQQLNLS KGLLVGSEQW QLDTLNLSSY HLLKFADKKS
PLSLAGQWTF DTDIETAIKT LQKVQPLPDN FTIQGHSKLI AGFALSEIGN TSQFEMKIQQ
QLSSLSGQWE DKTFNGGDVF AQCQFNWQQT HDGPNTPAAE KHFAHSQLVC PQTAISLQQA
KLGLSLTNLN LNADIELNKD GNKAPANWLQ QVTGLSETNI NLTASGDMLD GRFLLPEFVL
KLHDKSYGYL LLQGLSLEKF LEEQPQVGVK ANGLFDGVLP AVLVDGKVTV TGGKLAARAP
GGLIEVAGNP AMDQLELSQP YLGLVFTALE HLNYTELSST FDMIPNGDAQ INIAVKGNSR
DIERPVHLNY SHQENLIQLY KSTQIGNQLQ SKIEAKVQ
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