Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1618 |
Symbol | |
ID | 4277277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1927036 |
End bp | 1927896 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638134403 |
Product | hypothetical protein |
Protein accession | YP_750307 |
Protein GI | 114562794 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATG CTGTTTGTAC TTATGGTGGG CAAAGACACA CTTTTTCAAT TTTGAAATTT CAGGCGTTAC CTGAAACTGA AATTGAAAAA AGTAGGCAGT TTTTACAATG CCCAGAGTGC GAAGGAAAGG CTTACTATCG TAAGAGAAGC TCAGACGGTA AAGCGGCGTG TTTTGGCTCT CGATATCATG TTGCAGGATG CGATGAAGGC CACCCTTCAA CTCAACGAGA TCGAGAGACT CGGCATAGTG TAGAAGTGAA TAAGGTCATT TCTGATGCTG ATATTATTAG CATTGATTTC ATGTTATCAA ACAGCAAAAA GTCAGTTACA GAGGTGCAAA CTGTCACCGC TACATCAAGC CTCATCTCAA GCAGCCTCCC AAAAATCGAT AATGCCAGTC GCAAACATGC TGGCAGCAAT GAACAAGCTA AGGTCAAAGT ATTAGGGCTA GAGAAAATCC TCAATAGCTT AATGCGCGGC AGCGACTTAG CTGAATCGAG TACTTTGATT GAGCTTGATA CTGGTTATAA ATTTAAAGCC AAGAATTTAT TTGTTAACTT TGCCGAGGCT GAGCCAAGTG CTAATGCCAA AGAAGCAAAG CCTAAAATGT ACTGGGGTAC TATTTCACAT CTAGATAAAG AGCTTGATTG GTTAAACCCA TCTGATTGTA CTGATGTTGG CATTCCTATC TCTAAATATA AATCGATAAT ATTAGAACGT TTCAATGTAT CGGAAGGGCG TCAGTTAGAA GGTGCGGGGA TTATTTTGTT TGGAAAATGC TTTTGGAACT CAAAGAAGAC TCGCAAGATA ATTGAACTGT GGAATGCTGA CAGAATTTTT ATCTCAGTAC TAGAAGACTA A
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Protein sequence | MIDAVCTYGG QRHTFSILKF QALPETEIEK SRQFLQCPEC EGKAYYRKRS SDGKAACFGS RYHVAGCDEG HPSTQRDRET RHSVEVNKVI SDADIISIDF MLSNSKKSVT EVQTVTATSS LISSSLPKID NASRKHAGSN EQAKVKVLGL EKILNSLMRG SDLAESSTLI ELDTGYKFKA KNLFVNFAEA EPSANAKEAK PKMYWGTISH LDKELDWLNP SDCTDVGIPI SKYKSIILER FNVSEGRQLE GAGIILFGKC FWNSKKTRKI IELWNADRIF ISVLED
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