| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1615 |
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| Symbol | |
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| ID | 4277274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1922201 |
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| End bp | 1923313 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638134400 |
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| Product | agmatine deiminase |
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| Protein accession | YP_750304 |
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| Protein GI | 114562791 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACA TGAATGTGGA TGCCACGCAG TTAACGACTA AACCATCCCA AGATGGTTTT
AGCATGCCAG CCGAATGGGC GCAGCAGCAG GCTGTGTGGA TGATTTGGCC ATATCGTCCT
GATAACTGGC GCTCTGCAGG GGCTTATGCT CAGGCGACAT TTGCTAAAGT GGCCGATGCA
ATTGGTGCGG TTACCCCTGT TTATATGGGT GTGCCTAAGG CATTTTTGGC ACAAGCCAAG
ACGGTTATGC CTGCTCACGT TACTTTGGTC GAAATAGATA GCAACGATTG CTGGGCTCGC
GATACCGGAC CTACAGTAGT TGTCAATGCC AAGGGCGAAT GCCGTGGTGT TGACTGGGGC
TTTAATGCCT GGGGCGGCGA TAACGGTGGT TTGTATTCAC CATGGGATAA GGACGAGCTA
GTAGCGCAAA AGATGCTAAC TCAGCATGGT TTTGATCGTT ATCAGGCTCC GCTTATTCTT
GAAGGTGGTT CTATTCATGT CGACGGTGAA GGCACTTGCA TGACCACGGC TGAATGTTTA
CTTAACAGCA ACCGCAACCC CGATTTGACT CGTGAACAGA TAGAAGCATT ACTGGCTGAA
TATTTAAATG TTAAGCAGTT TATCTGGTTG CCAGACGGCG TGTACATGGA CGAGACTGAC
GGACACATTG ATAATCTATG CTGTTTTGCT CGTCCAGGCG AAGTGGTTTT ACACTGGACT
GATGATCAAA GCGATCCGCA ATATCCTCGT TCAAAAGCCG CTTTGGATAT TTTGCAAAAT
ACTGTTGATG CCCAAGGGCG TAAGTTAACA GTTCATCTAA TACCACAGCC TGGTCCTTTG
TATTGCACAG AAGAAGAAGC GCAAGGTGTA GCAGAAGGAA CTGGTGTTCC ACGTACGGCG
GGTGAGCGTT TAGCGGGTTC TTATGCGAAC TTTTTAATTA CCAATAATCG TATTGTTTTC
CCGTTACTCG ATCCAGTAAC CGACGATATA GCAGCTCAAA AATTGCAGGA AATATTCCCA
GAGTATGAGA TTGTCGGTGT GCCAGCCCGT GAGATTTTAT TAGGTGGTGG TAATATCCAT
TGTATTACTC AACAGATCCC TTCTGGAAAA TAA
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| Protein sequence | MTNMNVDATQ LTTKPSQDGF SMPAEWAQQQ AVWMIWPYRP DNWRSAGAYA QATFAKVADA
IGAVTPVYMG VPKAFLAQAK TVMPAHVTLV EIDSNDCWAR DTGPTVVVNA KGECRGVDWG
FNAWGGDNGG LYSPWDKDEL VAQKMLTQHG FDRYQAPLIL EGGSIHVDGE GTCMTTAECL
LNSNRNPDLT REQIEALLAE YLNVKQFIWL PDGVYMDETD GHIDNLCCFA RPGEVVLHWT
DDQSDPQYPR SKAALDILQN TVDAQGRKLT VHLIPQPGPL YCTEEEAQGV AEGTGVPRTA
GERLAGSYAN FLITNNRIVF PLLDPVTDDI AAQKLQEIFP EYEIVGVPAR EILLGGGNIH
CITQQIPSGK
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