Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1604 |
Symbol | |
ID | 4277996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1908250 |
End bp | 1909908 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134389 |
Product | peptidase M28 |
Protein accession | YP_750293 |
Protein GI | 114562780 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000577255 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGAT TGTTTCCTTT TTGCGCCATT GCCTTACTGT CAGCATGTAA CGGCGATGAT GCTAAACACA CTGCAACCGA CGATATTATT CCGGCTAAAG TGACTGCGGT AACCTTTGAT GAACAACGCT TTAGAACTGA TATCGAAACA TTATCGTCAG ATAAATTTGA AGGTCGCGCG CCGACAACCC AAGGCGAAAA GCTTACCCTA GAATATTTGT CTGCCGCCTT CACCCAAATG GGGCTTAAAG GCGCTTATAA AGGAAGTTTT TTGCAACCGG TTCCAATGGT GAGCTACACC GCAAGCGAGC AACAACAAGT TACTTTAGCT GGGATGGATT TACAGTATCG CCAAGATATC GTGTTAGGCA GTCGTCACGA TAGCAATCAA GTGAGTATTA AAGATGCGCC ATTAGTGTTT GTTGGTTACG GTATTAATGC ACCTGAATAT GGCTGGAATG ATTACCAAGA CCTCAACATG AAAGGCAAAA TTGCCATCAT TTTGGTCAAC GATCCAGGCT TTGCACATCC TGAAGGTGCC AAGTTCAATG GTAAGGCGAT GACTTACTAT GGTCGTTGGA GCTATAAGTT TGAAGAAGCC AGTCGCCAAG GCGCGTTAGG CGCAATTATC ATTCATGATA CAGAACCGGC CTCTTACCCT TGGTCGGTAG TTGAAAACAG CTGGACTGGT GCTCAACAAG ATTTAGTTCA AAGCAAAGCA GAACAAGATC AGCGGGTCCA AGTTGAAGGT TGGTTAACCT TAGACAGTGC TACAGCCTTA TTCGATAAAG CGGGCCTGTC ATTAACGTCA TTAATGGATC GCGCCGCAAC CAATTCACTC AATGTCGATT TGGCCCAAAC AGCCAGCATT GAATTTGCCA ATAAAGCCGA ATATGCCGAC AGTTATAATG TGGTTGCAAC ATTAGCTGGC AGCAAACAAG CTGATGAGCA GATTTTATTT ACTGCCCATT GGGATCATAT CGGTACAGAT GACACTAAAG ACGGCGACCA AATTTATAAT GGCGCGTTAG ATAATGCCAC TGGTACCGCC GGTATTTTAG AAATTGCCCG TCAGTTTGCC CAGCAAGCTA AACAAGGGCA TGGCTTAGCC CGTTCATTAA CCTTTATTGC TACTACTGGT GAAGAACAAG GCTTATTAGG TTCACGTTAT TATGCCGCTA ACCCAATTTA TCCAATTGAT AAAACCGTGG CAGTATTTAA CCTCGACAGC ACTAATATTT ATGGCAAAAC CAAAGATTAC ACGATTGTCG GTAAAGGCCA GTCTGAGTTA GAAAACTATT TAGACCGCGC TGTCGCTAAA CAAAATCGCA CCAGCCAAGG CGAGCTAAAC CCTGCATCGG GCGGTTTTTT CCGTTCAGAC CACTTCAGCT TTGCTAAATT AGGCGTGCCA GCAGTATTTG CCGGTGGTGG TAACGAACCA CTTGATGAAG CTACCGCACA ATACAAAACG GCAATGTTGG TCAAAATGAA GGGCTGTTAC CATAACGTTT GCGATCATTA TCGTCCTGAA TGGGATTTAT CCGGTTCATT ACAAGATTTA GGCGTGTACT ACCAAGCCGC TGCTGAGTTA GGTAATAATC AAGATTGGCC AGGATACTTT GCCGGTTCTG AATTTAATCA ATTACGTCCT GCAGATTAG
|
Protein sequence | MKRLFPFCAI ALLSACNGDD AKHTATDDII PAKVTAVTFD EQRFRTDIET LSSDKFEGRA PTTQGEKLTL EYLSAAFTQM GLKGAYKGSF LQPVPMVSYT ASEQQQVTLA GMDLQYRQDI VLGSRHDSNQ VSIKDAPLVF VGYGINAPEY GWNDYQDLNM KGKIAIILVN DPGFAHPEGA KFNGKAMTYY GRWSYKFEEA SRQGALGAII IHDTEPASYP WSVVENSWTG AQQDLVQSKA EQDQRVQVEG WLTLDSATAL FDKAGLSLTS LMDRAATNSL NVDLAQTASI EFANKAEYAD SYNVVATLAG SKQADEQILF TAHWDHIGTD DTKDGDQIYN GALDNATGTA GILEIARQFA QQAKQGHGLA RSLTFIATTG EEQGLLGSRY YAANPIYPID KTVAVFNLDS TNIYGKTKDY TIVGKGQSEL ENYLDRAVAK QNRTSQGELN PASGGFFRSD HFSFAKLGVP AVFAGGGNEP LDEATAQYKT AMLVKMKGCY HNVCDHYRPE WDLSGSLQDL GVYYQAAAEL GNNQDWPGYF AGSEFNQLRP AD
|
| |