| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1562 |
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| Symbol | |
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| ID | 4277798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1864967 |
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| End bp | 1866091 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134347 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_750251 |
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| Protein GI | 114562738 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.986622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT GGAGTAACAT TTTTTGGCTC GGTACTAAAG AGTTACGCAG CGTTCTTGGT
GACGTTGTTA TGGTAATGCT AATTATTTTC CTCTTTAGTG CCCAGATTTA TTCACGGTCA
ACAGCCATCA GCGAGTCGGT TAATAACGCT TCGATTGCTA TTGTCGATGA AGACCACTCT
ACGCTTTCTC GTAGCATTGC CAATGCTTTT TACCCGCCTT ATTTTAACCT TGCAGAGCAA
ATCTCTGCTA CTGAGATTGA CCAAGTTATG GATCAAGATC GTTTCATGTT TGTGGTCTCC
ATTCCACCAA GGTTTGAAGC AGATGTTCGT GATGGACGCT TGCCGAGTGT ACAGATAGAT
GTTGATGCTA CCGCAGTGAC TCAAGCGAGT CTAGGTAACC ACTATATTCA AAATATTATA
ACTAACGAGG TGAATTTTTT TGTTAATCGT TCAAACGAAA CAACAATCTA TCCAGTGGCT
TTAGTTCAAC GCCGAGCCTT TAACCCAAAT GGTACAATGA CCTGGTTTAG TTCGATTGGT
GCACTGCTCG ATAACGTAAC CTTGCTGGCC ATTATACTGA CTGGCGCTGC GTTATTGCGT
GAGCGTGAAC ATGGTACCAT TGAGCACTTG CTTGTTATGC CACTGACTTC GTTTCAAATT
ATCATGTCGA AGGTATGGGC TAACGGATTA ATTGTTTTAG TAGCTTTCTC GTTATCATTG
TTCTTTATGG TTGAGACCTT GTTAGATGTA CCCATTGCAG GATCTCGATG GTTACTACTT
GGCGGAACGA CCATTTATTT ATTTGCAGCA GCAGCCATCG GTATTTTTCT CGGTACAATT
GCCCGTACGA TGGCACAATT TGCACTACTG TTGATGATAG TGATAATACC CATGATGTTA
CTCTCTGGTG GGATCACTCC GATTGAGAGC CAGCCAGCTA TTATTCAACC ATTTACATGG
CTTTTCCCTT CGCGGCACTT TATGGCTTTT TCTCAGGCCG TTGTTTTTCG GGGTGCTGAT
ATCAGCATAG TGTGGCCAGA ATTACTCAAT ATCATTGGTC TAGGGGCTAT CTTTTTTGCT
TTCAGCCTTG CGCTTTTCCG TCGGTCAATT GCCGTTAGTA AGTAG
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| Protein sequence | MKTWSNIFWL GTKELRSVLG DVVMVMLIIF LFSAQIYSRS TAISESVNNA SIAIVDEDHS
TLSRSIANAF YPPYFNLAEQ ISATEIDQVM DQDRFMFVVS IPPRFEADVR DGRLPSVQID
VDATAVTQAS LGNHYIQNII TNEVNFFVNR SNETTIYPVA LVQRRAFNPN GTMTWFSSIG
ALLDNVTLLA IILTGAALLR EREHGTIEHL LVMPLTSFQI IMSKVWANGL IVLVAFSLSL
FFMVETLLDV PIAGSRWLLL GGTTIYLFAA AAIGIFLGTI ARTMAQFALL LMIVIIPMML
LSGGITPIES QPAIIQPFTW LFPSRHFMAF SQAVVFRGAD ISIVWPELLN IIGLGAIFFA
FSLALFRRSI AVSK
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