Gene Sfri_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1551 
Symbol 
ID4277787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1847339 
End bp1848013 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content41% 
IMG OID638134331 
Producttranscriptional regulator, GntR family protein 
Protein accessionYP_750240 
Protein GI114562727 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000349617 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA TACCTCCTAT TATTCATAAA ACGCGTACGC AACTTGTTGT TGAGGCGCTC 
AGAGAACGGA TCCTTTCTGG TGATATACAA GGAGGAGAAC CGCTTAGGCA GTCTGCTATT 
GCAGAACAGT TAAATGTAAG TCGAATTCCC GTTCGTGAAG CTTTAGTTCA ATTAGAAGCA 
GAAGGTTTGA TTAATTTCGA ACCACACAAA GGCGCAACGG CAACATTGTT ATCTGTTGAA 
CAAGTCACTG AATTATTTGA ACTGCGCGCT ATGATCGAAT CAGATTTGTT GGCTAAGGCC 
ATCCCTAACC TATCTGACAA AGATCTTGTT GAAGCTGAAG CCGTACTGGT TCAACTTGAA 
TTGGCATTTA AACTGAAAGA ATCAGTAGCA AGTTGGAGTG AACTGAACAC TCGATTCCAT 
ACCCGTTTAT ACCAAGCAGC TAATCGTCCT CATACAATGG AAGTGGTTAA CGGTTTAAAC 
ACTAATTGCG ATCGCTATAT TCGTCTGCAG TTGTTATTTA CTGGCGGGAT ACCTATCGCT 
GAAAGAGAAC ATCGAGTGTT ACTCGAATTA TGTAAAAATC GCGACATCGA AAAAGCCACA 
ACTTTACTGC GTGAGCATAT CTTGCATGCT TCGGCTTCGA TCACGAAACT GGTAGAACAA 
AAGATTAAGT CATAA
 
Protein sequence
MSNIPPIIHK TRTQLVVEAL RERILSGDIQ GGEPLRQSAI AEQLNVSRIP VREALVQLEA 
EGLINFEPHK GATATLLSVE QVTELFELRA MIESDLLAKA IPNLSDKDLV EAEAVLVQLE 
LAFKLKESVA SWSELNTRFH TRLYQAANRP HTMEVVNGLN TNCDRYIRLQ LLFTGGIPIA 
EREHRVLLEL CKNRDIEKAT TLLREHILHA SASITKLVEQ KIKS