Gene Sfri_1537 details

Gene Information

• Locus tag: Sfri_1537
• Symbol: recR
• ID: 4277773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1829377
• End bp: 1829976
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638134317
• Product: recombination protein RecR
• Protein accession: YP_750226
• Protein GI: 114562713
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0998333
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTA GTCCTTTGGT CGATGAATTA ATTCAATCTT TACGTGCGTT GCCTGGCGTC 
GGCCCTAAGT CTGCACAGCG TATGGCATTT CAATTACTTG AGCGTGAACG TAAAGTGGGC 
CTTAAGCTCG CAGATTCGTT GCAGAAAGCC ATGTCTGAAG TTGGACATTG TCAAAGTTGT 
CGTACGTTTA CCGAGCAAGA TTTATGCCCT ATATGCAGTA GCCATCGTCG CATTAATACT 
GGGATTATTT GCGTGGTTGA AACGCCTGCT GATGTGCTTG CTATTGAAGC TGGTGGCCAT 
TTTAATGGCC GTTATTTTGT GCTGTTAGGA CACTTATCGC CGTTAGACGG TGTTGGTCCT 
GAAGAGTTGG GGCTAGCGCT ACTTGAGCGC CATTTAACGT CGAATGAGGT GAGCGAGCTT 
ATTCTTGCTA CCAATCCGAC CGTTGAGGGT GACGCCACTG CACATTTTAT TGCTGATATG 
GCCAGAAGGC ATAATGTGGT GATTAGTCGT ATTGCTCATG GCGTCCCCGT GGGTGGAGAG 
CTTGAGTACG TTGATAGTAC CACTTTAGCA TTATCTTTTA ATGGTCGTAT TCCGCTGTAA 

 

Protein sequence

MKFSPLVDEL IQSLRALPGV GPKSAQRMAF QLLERERKVG LKLADSLQKA MSEVGHCQSC 
RTFTEQDLCP ICSSHRRINT GIICVVETPA DVLAIEAGGH FNGRYFVLLG HLSPLDGVGP 
EELGLALLER HLTSNEVSEL ILATNPTVEG DATAHFIADM ARRHNVVISR IAHGVPVGGE 
LEYVDSTTLA LSFNGRIPL