Gene Sfri_1532 details

Gene Information

• Locus tag: Sfri_1532
• ID: 4277487
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1824694
• End bp: 1825242
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638134312
• Product: nitroreductase
• Protein accession: YP_750221
• Protein GI: 114562708
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGACGCCA AACAACTGTT ATTGACTCGC CAATCGACGC CTCGCCTAGT TGCCCCAGCA 
CCAAATGCCG AACAACTCAC TTTTTTGCTT GATGCAGCAG CAAGAGTACC AGACCACGGT 
GCATTAACGC CTTGGGAATT TATTATTGCG GTAGATGATG GCTTAGCTAA ATTGGCAGAT 
ATTTTTGTTG ATGCGGCTAA AAAAAGTGGT GCAGATGAAA CTTTTCTGAC TAAAGTAGCC 
AACATGCCTT ATCGTGCACC TATGGTGATT ACGGTCGTCG CCAAAACTCA AACGCATGAT 
AAAGTACCAG TTTTAGAACA GCATATAGCA GCGGGTTGCG CCACGATGGC AATGCAGCAA 
GCCGCATTTT CGATGGGTGT AGGTGCTGTA TGGCGTACAG GCGATTTTGC TTTTGATGCA 
AATGTACATC AACAACTAGG CTTGTCTAAG CAAGATCAAA TAGTGGGCTT TTTATACGTA 
GGTACGCCAG CGGTAACTGC ACCAATAAAA CCATTAAAAA ATGGTCAGCA ATTCGCTCGC 
TATTTATAA 

 

Protein sequence

MDAKQLLLTR QSTPRLVAPA PNAEQLTFLL DAAARVPDHG ALTPWEFIIA VDDGLAKLAD 
IFVDAAKKSG ADETFLTKVA NMPYRAPMVI TVVAKTQTHD KVPVLEQHIA AGCATMAMQQ 
AAFSMGVGAV WRTGDFAFDA NVHQQLGLSK QDQIVGFLYV GTPAVTAPIK PLKNGQQFAR 
YL