| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1526 |
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| Symbol | |
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| ID | 4277481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1818677 |
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| End bp | 1820878 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134306 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_750215 |
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| Protein GI | 114562702 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.208571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCACGA AAAAATCTAT TGGCTTACAC CAAACTCCCA TTGCTTTAGC TGTTATTACA
GCATTGAGCT CGCCTGTTGC TATGGCTAAA ACTGCTGATG TTGAACGGGT AACTCCTGAA
TATGAAAAAA TGGAAGTTAT TGTTGTTAAC GCTGACTTTA GTAATATCAG CCTTGATAAA
ATGCCGTCAA GTGTGACGGT TATTGATGCC CAGCAATTAG AAGACGAAGG GGCACAACAT
TTTGAAGATG TGCTCAATTC TATTGCAAAC TTTAACTGGT CTGGTGGCAG TTCTCGTCCT
AAATACTTCC AAATTCGTGG TGTCGGTGAA CAAGAACAAT ATCAAGGTGC ACCCAATTCA
TCTGTTGGCT TTGTCGTTGA TGATATCGAT TTGTCTGGCC TTGGCATGGT GTCGAGTATG
TACGACATGC AGCAAGTTGA AGTATTGCGC GGTCCACAAG GCACCCAATA TGGAGCTAAT
GCGTTAGCTG GATTAATTTA CTTAAAAAGT AATGATCCTA CTGAATCATT TGAACATGGC
GCAAAAGTCA GTTTAGGTGA CGACAACCTT CGCACGCTTT CAGGCTTTAG TTCGGGTCCA
CTCAATGATT CGGGTAAATT GCTCTACCGT GTATCACTAG AACAACACAA TCAAAATGGC
TACCGTGATA ACCTTTATCT TAACCGTGAT GATACTAATG AGCGCGATGA GTTAACGGCG
AGAGCTAAGT TCCGTTGGTA CGCTACAGAC GATCTTCAAG TTGATTTAAC CTTATTACAT
GCCAATTTTG ATAATGGTTA CGATGTATGG ACATTAGATA ATAATCGCAG TAACACCTTA
ACTGACCAAC CCGGTATCGA TGCACAGAAA ACCACAGGAG TAGGAGTTAA GTTTATTTTC
ACGGGTATGC AAGCATTTGA CTTCACATCA TTAACATCAT TTGCGCAAAC TGATCATCAC
TATGCTTATG ATGGTGATTG GGCCAATTCG GATTATTGGG CGAGTAAAGC ATGTAGCGTC
TATGACGATG CGGGAGCTGT GTCTGGTACT GAGCCGTGTG TTTATGATTA CACCTGGGAC
AAAAAAGGCG ATCGTAAAAC CTTAACCCAA GAGTTCCGTT TATCATCCAA AGATGCAGGA
CGCATCCTCG CCGGTAGTAC CGACTGGTTG TTGGGTGTAT ACGCGATGAA TTTGAAAGAA
GATAACGACT TATACTCGGA ATACAACACC TGGCCAGATG AAGTATTGCA GTCAAATTAC
GAAGCGACAA ACTATGCCGT ATTTGGTCAG CTAGACAGCC ATTTAGGTGA TGATTACTTA
TTGTCGACAG GGTTACGTTT CGAGCGTCGC GATAGTGATT ATAGCGACAG CAATAAAGAT
AACTTTGCCC CATCAGAAGA TATGTGGGGA GGCCATATTG CGTTGTCAAA AGCCATTAAT
GCTAATCACA ATGCTTATGC TCGTGTCGCC CGCGGTTATA AGGCGGGCGG TTTTAATATG
ACATTGCCTG CTGAATTGTC TGACAAGAAA CAGTTCGACA CTGAGATTTT ATATAACTAT
GAAGTTGGCC TAAAATCGAG CTGGTTTGAT GGAGAAGTGG ATTCTACCTT GGCGCTGTTT
TATATGGATC GCCAAGATCA ACAAGTTGCC GCATCTTTAC AAGACCCAGA TAGCCCGCAG
CGTTTTATTC TATTTACCGA AAATGCCGGT AGTTCAAGTA ACTATGGCGC GGAACTCGAT
GCAAAATGGT ATTTGACAGA AAATATTGAA TTTTATGGTA GTTTCGGTTG GTTAGAAACT
GAATATGGTC AATATCAATA CAGTGACAAA TACGGTTCTA CCATCGATTT ATCTGGACGC
GATTTAGCGC ATTCGCCTAA ATTTACTTAC AGTGCCGGTA TGACCTATGT TGCTGATTCT
GGTTGGTTTG CAAACGTGAA TGCCAGTGGT AAAAGCCAGT TTTATTATTC TGACAGCAAT
GAATCGCAGT CAGAAGCCTA TACCATTTAC AACGCCCGCC TAGGTTATGA AACGCCAACA
TGGTCGGCAT ATTTATGGGG CCGTAATTTG TTTGATGAAC AATATGGTGT GCGAGGCTTT
TACTTTGGCA ACGAACCAGA TCAAGATTGG GCAGATAAGC AATATATTCG TTACGGTGAT
CCGCGCCAAA TGGGTGTGAC ATTAGAAGTT AAATTTATGT AA
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| Protein sequence | MFTKKSIGLH QTPIALAVIT ALSSPVAMAK TADVERVTPE YEKMEVIVVN ADFSNISLDK
MPSSVTVIDA QQLEDEGAQH FEDVLNSIAN FNWSGGSSRP KYFQIRGVGE QEQYQGAPNS
SVGFVVDDID LSGLGMVSSM YDMQQVEVLR GPQGTQYGAN ALAGLIYLKS NDPTESFEHG
AKVSLGDDNL RTLSGFSSGP LNDSGKLLYR VSLEQHNQNG YRDNLYLNRD DTNERDELTA
RAKFRWYATD DLQVDLTLLH ANFDNGYDVW TLDNNRSNTL TDQPGIDAQK TTGVGVKFIF
TGMQAFDFTS LTSFAQTDHH YAYDGDWANS DYWASKACSV YDDAGAVSGT EPCVYDYTWD
KKGDRKTLTQ EFRLSSKDAG RILAGSTDWL LGVYAMNLKE DNDLYSEYNT WPDEVLQSNY
EATNYAVFGQ LDSHLGDDYL LSTGLRFERR DSDYSDSNKD NFAPSEDMWG GHIALSKAIN
ANHNAYARVA RGYKAGGFNM TLPAELSDKK QFDTEILYNY EVGLKSSWFD GEVDSTLALF
YMDRQDQQVA ASLQDPDSPQ RFILFTENAG SSSNYGAELD AKWYLTENIE FYGSFGWLET
EYGQYQYSDK YGSTIDLSGR DLAHSPKFTY SAGMTYVADS GWFANVNASG KSQFYYSDSN
ESQSEAYTIY NARLGYETPT WSAYLWGRNL FDEQYGVRGF YFGNEPDQDW ADKQYIRYGD
PRQMGVTLEV KFM
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