Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1516 |
Symbol | |
ID | 4277471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1810227 |
End bp | 1811885 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638134296 |
Product | curlin-associated protein |
Protein accession | YP_750205 |
Protein GI | 114562692 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.977405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATT CTAAATTAGC GTTATTAATC TCAGCAGCGA TATTTACTTC AGCAGGGGCT TATGCAAGCG ACAATAATGT AGTCGATGTC GTCCAAAATG GTGCAAGTAA TACTGCTAAT GTCACACAGC AAGTAGGTAG TGACAATAAC GATGCAACTA TCGATCAAGA TGGCACTTCA AACGTTGCTA CAGTAAAACA ATCAGATACT TCAAATACTC ATGCGTTTGT TACTCAAAAA GGTGAGGGTA ATGAGGGGAC AATTACGCAG CATAATGCCA CTCAAACAGC TACAGCAATT ATTGATACAA GGGGTAACGA AAACGATGCA ACAATAGAGC AAGAATTTAA CAATGGGGAT GAAGCAGAAG CTACGATCAC TCAAAGAGGT GGTTCAAATG AAGCCGTAAT ATCACAATAC AATGGTGATG GTTCTGACTC AGCGATTAAT CAATTTGGTT CAGGGGACAA GGCTGAAATC GACAATATAT GGTCTGATTA TGCTACGGCA ATTATTACTC AGGAAGCTGG GCCTGGGAAT AATGCTTTAA TTACTCAATC AGACTCCGAT GCCGCTGAAG CGTATTTATC TCAAAATGGC GCTGGAAATT CAGGGGAAAT TTATCAAAAG ACAGATGAAA ATGGGAGTGC ACCCGGTGTT GATGATACTG TCGCAACGTT GACACAAACA GGCAATGATA ATACCGGTTA TATTGAACAA ACAGCTTTAT CAAATCTTGC TGATGTTTAT CAAAACGGTA ATGACAATCA AGCAGATGTT TATCAAACTG GTGAAAACAA CGAAGCTGAT GTTGATCAAC AAGGTGATAA TGATACTGCT TATGTAAGTC AATCAGGCCA GGATGGTTAC GCTTCTGTAA GTCAAAGTGG TAACACCTTA AATACTGGTT TAGTCTATCA AAGTGGTTTT AGCAATTCTG CGACTATCGC TCAAGTCGGT TCGGACCATA TGTCAACCAT TACCCAGTCT GAATATGACA ACGTAGCAAA TGTTGACCAA ACTAATGTGG ATAACAATGC AACTGTTACT CAAAGTGGTT CAGCCTCTGG AATGGGTAAT TTAGCAACGG TTATGCAGGA CGGTTTAGGT GATAGCGCAT TAGTCGAACA AATTGGTAGT GACAATACTG CAATTGTTGA ACAAGGAACA GATAGCCATG ATAATGATGT ATTCATTTAT CAAACTGGTA ACGAGAACTA TGCTGGCGCC TCAACTGAAC TAGGCGGTGA TAGCACTGTT ACGATTAATC AAGAAGGTAA TAATAACTAT GTTGGTAATT TGCCAGGAAC AAATAATTAT TATGGTCCTA ATGTAGGCGC TGGAACATAT GGCGCTGAAA ACGTAATTAC CATCGATCAA ATCGGTAATG AAAACAAAGC TTATGCTGAT TCATCAGACT TTTCATCAGA AGTAGATATC GACCAAACTG GGGATCTAAA TACTGCTATC GCAGAGTCTT GGTTAGGTAC TGATAATGAT ATTATGATTT CTCAAACTGG TACATTACAT AATGCAGATG TTTTTGTTAA TGGTGCGGGT AACAACATGG TATCAATTAC TCAAACTGAT GCGAGTAATA CGGCTAATGT AACTTCAATT GGCAACGGTA ACTCAGTTAC TGTTGTTCAA GGGATGTAG
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Protein sequence | MKHSKLALLI SAAIFTSAGA YASDNNVVDV VQNGASNTAN VTQQVGSDNN DATIDQDGTS NVATVKQSDT SNTHAFVTQK GEGNEGTITQ HNATQTATAI IDTRGNENDA TIEQEFNNGD EAEATITQRG GSNEAVISQY NGDGSDSAIN QFGSGDKAEI DNIWSDYATA IITQEAGPGN NALITQSDSD AAEAYLSQNG AGNSGEIYQK TDENGSAPGV DDTVATLTQT GNDNTGYIEQ TALSNLADVY QNGNDNQADV YQTGENNEAD VDQQGDNDTA YVSQSGQDGY ASVSQSGNTL NTGLVYQSGF SNSATIAQVG SDHMSTITQS EYDNVANVDQ TNVDNNATVT QSGSASGMGN LATVMQDGLG DSALVEQIGS DNTAIVEQGT DSHDNDVFIY QTGNENYAGA STELGGDSTV TINQEGNNNY VGNLPGTNNY YGPNVGAGTY GAENVITIDQ IGNENKAYAD SSDFSSEVDI DQTGDLNTAI AESWLGTDND IMISQTGTLH NADVFVNGAG NNMVSITQTD ASNTANVTSI GNGNSVTVVQ GM
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