Gene Sfri_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1502 
Symbol 
ID4277457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1791894 
End bp1792382 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID638134282 
Productthioesterase superfamily protein 
Protein accessionYP_750191 
Protein GI114562678 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0333721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGTA AAGATAGACA ACTTACATTA CGTTTTCTGG CAGAACCTGC AGATGTCAAT 
TTTGGCGGTA AGGTTCACGG CGGTGCAGTA ATGAAATGGA TCGATTTAGC CGCTTATGCA
GCAGCAGCAG GCTGGAGCGG TAAATATTGT ATTACTGTTT ATGCTGGCGG CATTCGATTT
GTTAAGCCTA TCCATGTGGG TAATATTGTC GAAGTGACTG GCAAAGTTAT TTATACCGGT
ACAACGTCTA TGCACATTGC CATTGATGTA AAAGCAGGCG ATCCTAAAGA ATCTGAACGT
CATCTGACAA CCCACTGTAT TGTTATTATG GTAGCAGTAG ACGATGAAGG ACATCCTACA
TCGGTTCCAG AGTGGATACC AGCCACCGCT GATGATGTTC GCTTACGTGA TAGTGCATTG
AGATTGATGG ATATGCGTAA ACGTATCGGT GCCGAAATGG AAGCTCACGT TAAACCTTCA
GTTGAATAA
 
Protein sequence
MAGKDRQLTL RFLAEPADVN FGGKVHGGAV MKWIDLAAYA AAAGWSGKYC ITVYAGGIRF 
VKPIHVGNIV EVTGKVIYTG TTSMHIAIDV KAGDPKESER HLTTHCIVIM VAVDDEGHPT
SVPEWIPATA DDVRLRDSAL RLMDMRKRIG AEMEAHVKPS VE