Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1502 |
Symbol | |
ID | 4277457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1791894 |
End bp | 1792382 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134282 |
Product | thioesterase superfamily protein |
Protein accession | YP_750191 |
Protein GI | 114562678 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0333721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGTA AAGATAGACA ACTTACATTA CGTTTTCTGG CAGAACCTGC AGATGTCAAT TTTGGCGGTA AGGTTCACGG CGGTGCAGTA ATGAAATGGA TCGATTTAGC CGCTTATGCA GCAGCAGCAG GCTGGAGCGG TAAATATTGT ATTACTGTTT ATGCTGGCGG CATTCGATTT GTTAAGCCTA TCCATGTGGG TAATATTGTC GAAGTGACTG GCAAAGTTAT TTATACCGGT ACAACGTCTA TGCACATTGC CATTGATGTA AAAGCAGGCG ATCCTAAAGA ATCTGAACGT CATCTGACAA CCCACTGTAT TGTTATTATG GTAGCAGTAG ACGATGAAGG ACATCCTACA TCGGTTCCAG AGTGGATACC AGCCACCGCT GATGATGTTC GCTTACGTGA TAGTGCATTG AGATTGATGG ATATGCGTAA ACGTATCGGT GCCGAAATGG AAGCTCACGT TAAACCTTCA GTTGAATAA
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Protein sequence | MAGKDRQLTL RFLAEPADVN FGGKVHGGAV MKWIDLAAYA AAAGWSGKYC ITVYAGGIRF VKPIHVGNIV EVTGKVIYTG TTSMHIAIDV KAGDPKESER HLTTHCIVIM VAVDDEGHPT SVPEWIPATA DDVRLRDSAL RLMDMRKRIG AEMEAHVKPS VE
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