| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1488 |
|---|
| Symbol | |
|---|
| ID | 4278055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1776646 |
|---|
| End bp | 1777563 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638134269 |
|---|
| Product | bifunctional methionine sulfoxide reductase B/A protein |
|---|
| Protein accession | YP_750178 |
|---|
| Protein GI | 114562665 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATT TAACCGAATT TGAAAAATAT GTTATTGAAC AAAAAGGTAC TGAACGGCCT
TTTAGCGGTG AATATGTTGA TCATGATGCA CAAGGCGTTT ATTTATGTAA AAAGTGCTAT
GCACCTCTAT ATAAGAGTGA GCATAAGTTT AATGCCCATT GTGGCTGGCC TGCATTTGAT
GATGAAATTA AGGGAGCAGT AGAACATACT CCTGATGCCG ATGGACATCG AACCGAAATT
ACCTGTGCAC AATGTGGCGG TCATTTAGGC CATGTGTTTG AAGGGGAGCA TTTAACAGAT
AATAATGTTC GTCATTGTGT TAATTCAGTA TCGATGATTT TTAAATCTCG TGATGAATTA
GCACAATCAA GTTCGGCTAA AACTTCTTAC CAAAAGGCTA CTTTTGGAGC TGGGTGCTTT
TGGTGTGTCG AGGCTATTTT TGCTCAATTT AAAGGCGTGC ACAGTGTTAA ATCAGGTTAT
TGTGGCGGTG ACGCTAAAGA TGCAAATTAT GATGCTGTGT GTTCTGGTAA AACCGCGCAC
GCAGAAGTCA TTCATATTGA GTTCGATCCC GCTGTAATTC AATACGACAC TCTGCTAAGT
GTATTATTTG AAAGCCATGA TCCGACAACA CTGAATCAGC AGGGCAATGA CAAAGGCCCG
CAATACCGTT CGGCAATTTT TGTTCATAAT AGTGAACAAG CTGATGCCGC CAATAAATTC
ATCAATACCT TAACTCAACA GCAAGTATGG CCTAGACCTA TTGTGACCGA AATAAGCGCG
TTTGACACTT TCTATCCCGC TGAAAATTAC CATGATGATT ACTTTGCTAA ACACGGTCAG
CAACCATATT GCCAACTTGT GGTGAAGCCA AAATTTGACA AAGTGATGAG TAAATTTGCA
GATAAACGTA AAGTGTAA
|
|---|
| Protein sequence | MNDLTEFEKY VIEQKGTERP FSGEYVDHDA QGVYLCKKCY APLYKSEHKF NAHCGWPAFD
DEIKGAVEHT PDADGHRTEI TCAQCGGHLG HVFEGEHLTD NNVRHCVNSV SMIFKSRDEL
AQSSSAKTSY QKATFGAGCF WCVEAIFAQF KGVHSVKSGY CGGDAKDANY DAVCSGKTAH
AEVIHIEFDP AVIQYDTLLS VLFESHDPTT LNQQGNDKGP QYRSAIFVHN SEQADAANKF
INTLTQQQVW PRPIVTEISA FDTFYPAENY HDDYFAKHGQ QPYCQLVVKP KFDKVMSKFA
DKRKV
|
|---|
| |