| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1457 |
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| Symbol | |
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| ID | 4278461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1741380 |
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| End bp | 1742249 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134232 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_750147 |
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| Protein GI | 114562634 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.298949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCGAA AACTGATGGT CCTCACAAGT TTGTGTCTTT GCTCAACGGC TAATGCCGAC
TTGAGGCACT ACGTTGCGTC ATTAGAAAAC TCTGCATGGC GTATTGGTGA GAACAATCCA
ATAGAATGCC GTCTTGAACA TGATATTCCT GACTATGGGC GAGCTGTGTT TACCAGTAAC
GCCGGTAAAG CGTTAAATTT ACATTTCACG TTAGACATGT GGCTAAAACC TGATGCAGTG
ACTAAAGCGA CATTAATTAG TCGAGCCCCT AGTTGGCGCC CAGGACACAA TTCTAAAGAA
ATCACTCAAC TGACTTACAA TAAGCAGTTT AATGGTGAAG TGCCTAAAAA AGCTGCCTGG
TCTATGCTGA ATGAATTGAG CCAAGGAATG GAACCCACGT TTTATTATGC TGATTGGTAT
AATCACAATG CCAAGATTGC CGTCGGTTTG TCATCGGCTA ATTTTGGCGG TAAATACCGT
GAATTTCGTG CTTGCTTAGC TAATTTATTG CCATACAGTT TTGATGATAT TGCTTTTACG
GTGTTAAATT ACCAAGAAGG CGGGGTAGAG CTTACTCGTT TTTCTAGCCA GCAATTACAG
AAAATACAGC GTTATTTGTC TTTTGACCCT GAAGTAGAGC TCGTGCTCAT TGATGCTTAC
ACCGACAGTT ACGGTGGACG TTCGGTTAAC CAAAAGGTGT CAGATAAGCG TGCTGATTCA
GTGAAAGATA TTCTTATTGC TAGTGGTATC CCTAAAGATC GGATTCATAC ATCGGGTCAT
GGTGAGAAAC GCCATGTAAC AGGTAATGAT CTTGCAGAAG AACGTAAGAT GAATCGTAGG
GTCGTGATTA AAATAACCAA ACCTATATAA
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| Protein sequence | MWRKLMVLTS LCLCSTANAD LRHYVASLEN SAWRIGENNP IECRLEHDIP DYGRAVFTSN
AGKALNLHFT LDMWLKPDAV TKATLISRAP SWRPGHNSKE ITQLTYNKQF NGEVPKKAAW
SMLNELSQGM EPTFYYADWY NHNAKIAVGL SSANFGGKYR EFRACLANLL PYSFDDIAFT
VLNYQEGGVE LTRFSSQQLQ KIQRYLSFDP EVELVLIDAY TDSYGGRSVN QKVSDKRADS
VKDILIASGI PKDRIHTSGH GEKRHVTGND LAEERKMNRR VVIKITKPI
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