Gene Sfri_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1410 
Symbol 
ID4277103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1682047 
End bp1683411 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content42% 
IMG OID638134184 
Productalpha/beta hydrolase fold 
Protein accessionYP_750100 
Protein GI114562587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAATA TGGTTTATAA AATAGCGTTA TTACCGCTGG CAATATACAT TAATTCTGAC 
TCAGCAGGCC TTATTATGCA CATTGAACTC ACCTTATCAG ACATCGTCGC CCGTAAACAT
TTTTTCTCTG TGCCATTAGA CTATCAACAA AGTCCAAGTA AACAGATTAC GGCTTTCGCA
CGGGAAATTG TCAGTGTCGA AAATCAACAT AAAAAACTAC CCTACTTAGT GTTTTTTCAA
GGTGGACCGG GTTTTGGCGC AGTAAGACCT GTGAGCAATA GTGGCTGGAT AAAACGCGCG
TTAACTGAAT ATAGAGTGTT ATTACTCGAC CAACGAGGCA CCGGACTATC AAGCCCGGTT
AATGCCACCA GCTTAAGTTA CATGAGTTCA ACGGACCAAG CGGACTACCT AAGCTTTTTC
CGTGCAGACA ATATTGTTCG AGATGCAGAG TATATTCGCG CAAAATTATC GCCAGATGAA
CCTTGGAGTA TTTTAGGCCA AAGTTTTGGT GGATTTTGTG TATTGCATTA TTTATCTGCT
GCACCAGAAG GCCTAAAAGA GGCATACATT ACCGGTGGTA TTCCTTCACT AGACCGCCCT
GCTGAAGAGG TTTACCAAGC CACTTATCAA CGTGTCATCG CTAAAAACAA TGACTTTTTC
AAGCGCTTTA GTGATGCACG CACCTTAGTC GATGACTTAG CCAAATACCT TTACGAAAAC
AAAGTCTACT TAGCAACTGG TGAGCAACTC ACGGTTGAAA TGTTGCAGTT ACTAGGCATT
AATATCGGTA TGGAACAAGG CCCAGAAGCG GTTTACTATC TGCTTGAGCA AGCGTTAATT
GAAACACCGC ATGGTATCGA CGTTAATCCA CTGTTTCTAC ATCAGTTCAG TCAATTTCTC
GACTACAACA CCAACCCTAT TTTTGCATTA ATGCATGAGT CTATTTATTG TCAGCAACAA
GCATCAGCTT GGGCGGCACA CAGAATACGA GCACAATACA GCCAATTTAA CTATCGCCCT
GACAAACCAT TATTGTTCAC TGGCGAAATG GTCTATCCGT GGATGTTTGC CCAATTTGAA
CAACTCATTC CACTGCAACA AGCCGCTGAG CTTATCGCAG CGAAAAAAGA CTGGCCTGTG
TTATATGACC TAGAAAAACT GGCTAATAAT AAAGTCCCGG TTGCAGCCGC AATATACAGC
GAAGATATGT ATGTCGAAAT GCAATACAGT TTAGAAACCA CAAAAAAAGT GGCGAACCTT
AAGTATTGGC TCACATCAGA ATATGAGCAC AATGGCATTC GTATGGACGG CGAACGCGTA
CTCGATAAAT TGATAAGCCT CAATCGCGGC CACTGTTTAC GCTAG
 
Protein sequence
MYNMVYKIAL LPLAIYINSD SAGLIMHIEL TLSDIVARKH FFSVPLDYQQ SPSKQITAFA 
REIVSVENQH KKLPYLVFFQ GGPGFGAVRP VSNSGWIKRA LTEYRVLLLD QRGTGLSSPV
NATSLSYMSS TDQADYLSFF RADNIVRDAE YIRAKLSPDE PWSILGQSFG GFCVLHYLSA
APEGLKEAYI TGGIPSLDRP AEEVYQATYQ RVIAKNNDFF KRFSDARTLV DDLAKYLYEN
KVYLATGEQL TVEMLQLLGI NIGMEQGPEA VYYLLEQALI ETPHGIDVNP LFLHQFSQFL
DYNTNPIFAL MHESIYCQQQ ASAWAAHRIR AQYSQFNYRP DKPLLFTGEM VYPWMFAQFE
QLIPLQQAAE LIAAKKDWPV LYDLEKLANN KVPVAAAIYS EDMYVEMQYS LETTKKVANL
KYWLTSEYEH NGIRMDGERV LDKLISLNRG HCLR