| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1384 |
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| Symbol | |
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| ID | 4277007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1647795 |
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| End bp | 1648331 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134158 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_750074 |
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| Protein GI | 114562561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.121569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATT TAGCAACATT TATTACCGTT ATTTTTATGC TGTTATTGGT ATTTAAACCA
ATAACAGCCA ATGCGGAAAC ACATAGTTAC CGTCTAGGTG CCGGCGATAC CATAGTGATT
AAAGTGTATG GTGAAGAGGC GTTAACCCTC GAAACCCAAA TCACCAACAG TGGCACCATT
AATTATCCGT TTTTGGGGGC TTTGCAATTA AATGGCTTGA CCATAAAAGC GGTTGAAAAG
TTAGTTTATA ATGGCTTAAA AGGTGATTAT TTTGTTGAGC CTAATGTGTT TGTTGGCATG
GTATTATATC GACCTTTTTA TATCCACGGT GAGGTTAAAC AACCAGGTGG TTACCCTTAT
CAACCGGGGA TGACCGTTAA CCAGGCGATT GCCTTAGCAG GTGGCTTAAC TGAACGGGCC
TCGGAAGAAA AAATAGCCAT TTCTCGCGAG GGCAGCAAAG TTGAGTCCGA ACGTGGCACT
ATCAACAGCG CTATTCAAGC TGGCGATACT ATTACCATTG AACAGAGATT TTTTTAA
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| Protein sequence | MKYLATFITV IFMLLLVFKP ITANAETHSY RLGAGDTIVI KVYGEEALTL ETQITNSGTI
NYPFLGALQL NGLTIKAVEK LVYNGLKGDY FVEPNVFVGM VLYRPFYIHG EVKQPGGYPY
QPGMTVNQAI ALAGGLTERA SEEKIAISRE GSKVESERGT INSAIQAGDT ITIEQRFF
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