| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1382 |
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| Symbol | |
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| ID | 4277005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1644675 |
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| End bp | 1646075 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638134156 |
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| Product | sugar transferase |
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| Protein accession | YP_750072 |
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| Protein GI | 114562559 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.254818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCGC AAAAAGCTTT GGATGTTGAA AAAGATAGCT ATACATTTCT GTATCGACTC
ATTGATATCT TAATTATTAT TATTTGTTTC AATTCAGCAC TTATTTTATA CGGTGAAGAT
TTTTCTAAAG ATTACTTAAT TGTATTAATT TTCACCCTGC TTGTTTATTC CTACTTATCA
GAATCATTTC AATTATATCG TTCTTGGCGG GTAGGGAAGT TTTCAAGGAT GATAGGTTCA
TTGTGTTTAG TTAAACTTTT TTGTTTTTTT ATTGTCGCAT CGAGTTTATT CCTCCTTAAA
GAGTCTGAAT CATATTCTCG TATTATCATT GTTGGTTGGT TTTCATTATC TATAATATCA
CTGATGACCT GGCGATATTT AGCCAAATGG GTAAAATCAA TACGAAGACG ATCCGGGTTG
GGTTTTCAAG ATGTTGCTAT AGTCGGCTTA ACATCAACAG GTATAAATCT TTATCGTGAA
ATAATAAAAA ACTATGAATT AGGATTTAAT TTTGTTGGTT TTTTTGATGA TAGAGAACCA
AAACGTTTAG GTGGTATGCA AACTAACCTT ATTGAAGGTG ATGTTAATGA AGCTGTTGCA
TTAGCCAAAA GTGGTAAAAT ACAAAAGTTG TATATTTGCT TACCCATGGT GGCAGAAAAG
CGCATAGCTG ATATTATTGA ACAGCTTGGA AATACCACCG TTGATGTGTT AATTACCCCT
GATTTTTTAC TCAAAAACTT AATGCAGGCA CGTATCGGTA GTGTTGGTGA TGTCGATACT
ATTAGTGTAT TTGAGTCGCC GGTAAATGGC ATGAGACGTT TTTACAAACG AACTTTTGAT
GTACTTTTTA GTTTTACCGC TATTTTAGCT CTAACGCCTA TTTTTTTGGT GATTGGTGCT
GCGATTAAAC TCAATTCACC AGGTGCTGTT ATTTTTAAAC AAGACCGATA TGGTTTAGAC
GGCCGCAAGA TTAAAGTTTG GAAGTTCCGC TCAATGAGCG TAACAGAAAA TAGTGATGTT
GTTACACAAG CCACTAAAGG TGATGCACGT ATTACTACCG TGGGTGCTTT TTTACGAAAA
ACATCTTTAG ATGAATTACC GCAGTTTTTT AATGTGTTAT TTGGCGATAT GTCGGTAGTA
GGTCCACGGC CTCATGCGGT AGCTCATAAC GAGGAGTATC GTAAGTTAGT CACTTATTAC
ATGCTACGTC ACAAGGTGTT GCCGGGTATT ACTGGTTGGG CACAAGTTAA TGGTTGGCGC
GGCGAAACCG ATACTCTAGA TAAGATGGAA AAACGAATTG AGTACGACTT AGCTTACATT
CGTAACTGGA CCCTGTGGTG GGACGTTAAG ATTGTGTTTA TGACAATTTT TAAAGGTTTT
GTTGGTAAGA ACGTTTATTG A
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| Protein sequence | MDAQKALDVE KDSYTFLYRL IDILIIIICF NSALILYGED FSKDYLIVLI FTLLVYSYLS
ESFQLYRSWR VGKFSRMIGS LCLVKLFCFF IVASSLFLLK ESESYSRIII VGWFSLSIIS
LMTWRYLAKW VKSIRRRSGL GFQDVAIVGL TSTGINLYRE IIKNYELGFN FVGFFDDREP
KRLGGMQTNL IEGDVNEAVA LAKSGKIQKL YICLPMVAEK RIADIIEQLG NTTVDVLITP
DFLLKNLMQA RIGSVGDVDT ISVFESPVNG MRRFYKRTFD VLFSFTAILA LTPIFLVIGA
AIKLNSPGAV IFKQDRYGLD GRKIKVWKFR SMSVTENSDV VTQATKGDAR ITTVGAFLRK
TSLDELPQFF NVLFGDMSVV GPRPHAVAHN EEYRKLVTYY MLRHKVLPGI TGWAQVNGWR
GETDTLDKME KRIEYDLAYI RNWTLWWDVK IVFMTIFKGF VGKNVY
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