| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1375 |
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| Symbol | |
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| ID | 4276982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1636544 |
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| End bp | 1637347 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638134150 |
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| Product | glycosyl transferase, WecB/TagA/CpsF family protein |
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| Protein accession | YP_750066 |
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| Protein GI | 114562553 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTT TTGAAGTGGA TAAGGTTAAT GTTGGTGGTA TTCCAACAGC TTGTATAGAT
CGAAAAGAAC TCGCAAACTT GATAGGTGAA CATTGTGTTA ATAACAAAAA TGAAGAAATA
AAAAAATCGA TTGTTATTTT TAGTAATAAT GGACATGCTA TTTCAATAGC TAATACTAGC
AGTGAAGCAA TGAAGTTGTT ATTACAAGCT GATTTAATTC ATGCAGATGG TCAAAGTGTA
GTAACGTTTT CCAAGTGGGT AAAGGGCCGT AATATTCCGG AAAGAACTGC AACTACAGAT
ATGATTCATG ATATCCCTAA CTATTTTGAA TCCAATATAA ATCATTTTCT TTTAGGTTGT
GAAAACGATA TTGTTGAAAA CGCTTGTAAG TTAATGAGTA AACGATATAA AAACTTTAAG
ATATCAGGGT TTAATGATGG TTTTTTTAGC ATTGAGGAGG AAGATGAGAT TATTGACAAG
ATAAATTCCT CTAGAGTCGA TGTTCTCTGG GTAGGCTTGG GTAAACCAAA AGAACAAGAG
TTTTGTATTA GAAATAAAGA AAAGTTAAAT GTTTCTGTAA TAATTACATG CGGTGGCTGT
TACAATTATA TAACAAATGA CTATCCTAGA GCTCCAGTTT GGATGCAAAA AATTGGATTT
GAGTGGTTAC ACCGCATGTC AACTAACCCA AGAAAATTAT TTTATCGATA TTTAACAACA
AACCCTCATG CAGTATATTG CGTGATAAAA AATGAAATTA TTTTTATGAA AAATAAAAAC
AACTCCAATA TAAATGGTTT TTAA
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| Protein sequence | MNIFEVDKVN VGGIPTACID RKELANLIGE HCVNNKNEEI KKSIVIFSNN GHAISIANTS
SEAMKLLLQA DLIHADGQSV VTFSKWVKGR NIPERTATTD MIHDIPNYFE SNINHFLLGC
ENDIVENACK LMSKRYKNFK ISGFNDGFFS IEEEDEIIDK INSSRVDVLW VGLGKPKEQE
FCIRNKEKLN VSVIITCGGC YNYITNDYPR APVWMQKIGF EWLHRMSTNP RKLFYRYLTT
NPHAVYCVIK NEIIFMKNKN NSNINGF
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