| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1359 |
|---|
| Symbol | |
|---|
| ID | 4276966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1617712 |
|---|
| End bp | 1618530 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638134134 |
|---|
| Product | phosphate transporter ATP-binding protein |
|---|
| Protein accession | YP_750050 |
|---|
| Protein GI | 114562537 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1117] ABC-type phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR00972] phosphate ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0675287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCTA TTGATAGTTC AGCAATGCAA ACAGAAGCCG TTGATTTAGC TAATTTACCG
GCACAGGATA CCGCACTTGA AATTCGTAAC CTTGATTTAC GTTACGGTGA CAAGCAAGCG
CTATTTGATG TGTCGATGAA GATCCCTAAA AAACAAGTTA CGGCATTTAT CGGCCCAAGT
GGTTGTGGTA AATCAACGCT GTTACGTTGC ATTAACCGCA TGAATGATTT GGTTGATAGT
TGTAAAATTG AAGGTGAAAT CTTACTTCAT GGGCAGAATA TTTATGACAA GAAAGTTGAT
GTCGCAGCAC TACGTCGTAA CGTCGGCATG GTGTTTCAGC GTCCTAACCC ATTCCCTAAG
TCAATTTACG AAAACGTAGT GTATGGCTTA CGTTTACAAG GGTTAAGCAA CCGTCGTGAT
TTAGACGAAG CGGCAGAGCG TTCATTACGT GGCGCAGCGA TTTGGGACGA AGTGAAAGAC
CGTCTACACG ATAATGCTTT TGGTTTATCT GGTGGTCAGC AACAACGTTT GGTGATTGCC
CGTGCTATTG CTATTGAGCC AGAAGTACTG CTACTCGATG AGCCAACGTC AGCACTTGAC
CCAATCTCGA CTTTAACCAT TGAAGAATTG ATTACTGAGC TAAAACAACA GTATACCGTG
GTAATTGTGA CGCATAACAT GCAACAAGCG GCTCGAGTGT CTGATCAAAC GGCCTTTATG
TACATGGGTG AGTTGGTTGA GTACGCTGAT ACCAACACTA TTTTCACGAC CCCTAAAAAG
CGTAAAACAG AAGATTATAT TACCGGTCGT TATGGTTAA
|
|---|
| Protein sequence | MISIDSSAMQ TEAVDLANLP AQDTALEIRN LDLRYGDKQA LFDVSMKIPK KQVTAFIGPS
GCGKSTLLRC INRMNDLVDS CKIEGEILLH GQNIYDKKVD VAALRRNVGM VFQRPNPFPK
SIYENVVYGL RLQGLSNRRD LDEAAERSLR GAAIWDEVKD RLHDNAFGLS GGQQQRLVIA
RAIAIEPEVL LLDEPTSALD PISTLTIEEL ITELKQQYTV VIVTHNMQQA ARVSDQTAFM
YMGELVEYAD TNTIFTTPKK RKTEDYITGR YG
|
|---|
| |