| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1336 |
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| Symbol | |
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| ID | 4278010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1589683 |
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| End bp | 1590627 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134111 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_750027 |
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| Protein GI | 114562514 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.198455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTTC GAATTCCAGA TAACCTGCCT GCAGCAGGTA TTTTAGAGTC AGAAAATATC
TTTGTGATGT CTGAAACCCG AGCTGCTAAT CAGGACATTC GTCCAATGCG GGTATTAATC
TTGAATCTAA TGCCTAATAA AATCGAAACA GAAACCCAGT TATTGCGATT ACTGGGCAAT
ACGCCCTTGC AAGTTGGGGT CGATTTATTA CGCATTCATG ATAAAGAATC AAAGCATACA
TCAGTGGATC ACATGAATAC CTTTTATCGT GATTTTGAAG ACATCAGAAA TAACAATTAC
GATGGTTTGA TTATTACTGG CGCGCCGTTA GGGCAAATTG ATTTTAAAGA TGTTGTGTAT
TGGGACCACA TTCGCGAAAT TATTGACTGG TCACAACAAC ATGTCACTTC GGTGCTGTTT
CTATGCTGGG CAGCTCATGC CGGTTTGTAT CATCTTTATG ATTTACATCG TCAGTTATTA
GCTAATAAAC GTTCAGGTGT ATTTAATCAT CGTAGAACCA GCGACCCACA CCCACTATTG
CGTGGTTTTG ATGATGAGTT TTTTGCACCG CACTCACGAT TTGCAGAAAT GGATATTGAA
CAAATTCGTC AACATCCAGA TTTAGAAGTA CTGGCTGAAT CAGACGAGGC TGGCGCGTAT
ATTGTGCTGA GTCGTGATAA TCATAATGTG TTTGTTATGG GACACCCAGA GTACCAAAAA
GACACACTGA ATGAAGAATA TGTGCGCGAT GTTGGTGAAG GCCTCAATCC AGATATTCCA
CAAAATTATT ACCGTCAAGA TGATCCCACA CAAGATACTA TTGTTCGTTG GCATAGTCAT
GGCAGCTTAT TAGTCAGTAA TTGGCTCAAT TATTATGTTT ATCAGCTAAC GCCATATGAC
TTGTCTGATA TGAATGCTAA AACACCATGG GAAAGTAAAA AGTAA
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| Protein sequence | MPVRIPDNLP AAGILESENI FVMSETRAAN QDIRPMRVLI LNLMPNKIET ETQLLRLLGN
TPLQVGVDLL RIHDKESKHT SVDHMNTFYR DFEDIRNNNY DGLIITGAPL GQIDFKDVVY
WDHIREIIDW SQQHVTSVLF LCWAAHAGLY HLYDLHRQLL ANKRSGVFNH RRTSDPHPLL
RGFDDEFFAP HSRFAEMDIE QIRQHPDLEV LAESDEAGAY IVLSRDNHNV FVMGHPEYQK
DTLNEEYVRD VGEGLNPDIP QNYYRQDDPT QDTIVRWHSH GSLLVSNWLN YYVYQLTPYD
LSDMNAKTPW ESKK
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