| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1317 |
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| Symbol | |
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| ID | 4277379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1569874 |
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| End bp | 1571181 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134092 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_750008 |
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| Protein GI | 114562495 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease
[TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACTT CACCGCTTCA ACCTGAGTTG GCAAATGCCG ATTCAACTCA CCAGCAGGGT
AACTTTCGTT TTGCCTTGAT AGCGTTAACC TCGTTATTTT TTATGTGGGG TTTTTTAACG
TGTTTAAATG ATATTTTAAT CCCTTACTTA AAAAACATGT TCGACCTTAA TTACACCCAA
GCAATGCTAG TGCAGTTCTG CTTTTTTGGT GCTTACTTTA TTGTGTCAAT TCCTGCTGGC
GCGTTAGTGG GTAAGATTGG TTATCAAAAA GGCATTATTA CCGGGTTAGT GATTGCTTGT
GTGGGGTGCT TACTGTTTTA TCCGTCGGCC AGTTATGGCT CTTATAATAT GTTTTTATTC
GCGTTTTTTA TTCTTGCATC GGGTATTACT ATCTTGCAGG TGTCAGCAAA TCCTTATGTG
AGTGTGTTAG GCCCAGCCGA AACCGCATCG TCGCGGTTGA CCTTAACTCA AGCATTCAAT
TCATTAGGCA CCACAGTAGC GCCATTTTTT GGTAGCTGGT TAATTTTGTC GACCGTTGAA
CATGACAGCA AAGTCACTGA GGTTGGCGAA GTCATCGGTC AGTTGTCTGT GCAGCAGCAA
GCGAGTGCAG TACAAACGCC TTACCTTATT TTAGCCGCTG CATTATTCGT ATTGGCATTC
ATTTTTATGC TGCTCAAACT ACCTTTGTTG GGCAAGCGCG ATACTCAATC AACTGCTGCG
GTAAAAGGCA GTGCATGGCA ATATCCGCAT TTGGTGTTGG GTGCAGTCGG TATTTTTGTT
TATGTTGGCG CAGAAGTCGG CATAGGCAGT TTTCTTATTA GCTTTATCAC TAAAGATGGC
ACCGGTGGAG TGTCTGAATC GCAGGCGGCG CATTATATTG CCTATTATTT TGGTGGTGCT
ATGGTCGGCC GTTTTATCGG CGCTGCAGTG ATGCAAAAAA TCAAAGCAGG CAAGGTGTTA
GCATTCAATG CGTTATGTGC GTGTATTTTA GTTGCAGCGG CAATCTTGAG TGCTGGTACG
GTTGCGATGT GGGCATTACT GCTGGTGGGC TTGTGTAACT CAATTATGTT CCCAACCATT
TTCAGTTTAG CGCTACAAGA TTTAAAACGA CACACCAGTC AAGGTTCGGG CATTTTATGT
TTAGCTATCG TTGGTGGGGC GGTTCTACCG TTATTGCAAG GCATGCTAGC TGACAGCATG
GGAATTCAAT TTGCCTTTAT TTTACCTTTA TTATGCTACG GGTTTATTGG TTATTACGGT
TTGATTGGAT GTGATGCAAA ACGTCCAGTA TTCGCAGATA AGGTATAA
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| Protein sequence | MATSPLQPEL ANADSTHQQG NFRFALIALT SLFFMWGFLT CLNDILIPYL KNMFDLNYTQ
AMLVQFCFFG AYFIVSIPAG ALVGKIGYQK GIITGLVIAC VGCLLFYPSA SYGSYNMFLF
AFFILASGIT ILQVSANPYV SVLGPAETAS SRLTLTQAFN SLGTTVAPFF GSWLILSTVE
HDSKVTEVGE VIGQLSVQQQ ASAVQTPYLI LAAALFVLAF IFMLLKLPLL GKRDTQSTAA
VKGSAWQYPH LVLGAVGIFV YVGAEVGIGS FLISFITKDG TGGVSESQAA HYIAYYFGGA
MVGRFIGAAV MQKIKAGKVL AFNALCACIL VAAAILSAGT VAMWALLLVG LCNSIMFPTI
FSLALQDLKR HTSQGSGILC LAIVGGAVLP LLQGMLADSM GIQFAFILPL LCYGFIGYYG
LIGCDAKRPV FADKV
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