Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1316 |
Symbol | |
ID | 4277378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1568160 |
End bp | 1569491 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638134091 |
Product | Beta-glucosidase |
Protein accession | YP_750007 |
Protein GI | 114562494 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA TGTTACCAGC CGATTCCAAA ATGCATTCAA AAGCGTTCAC CTTTGGTGTG GCGACTGCTT CTTTTCAAAT TGAAGGCGCA GTGGATTATC GTCTTCCTTG TATATGGGAT ACCTTTTGTG CCACGCCAGG TAAAATTCGT GATAACTCTG ACGGCTCGCA AGCATGCGAG CATGTAAAGT TATGGCGTGA AGATGTCGAT TTAATTGAGT CGCTGGGCGT TGACGCTTAT CGCTTATCCA TTTCGTGGCC ACGCGTAATG CATAAAGATG GCAGCCTCAA TCCACAAGGT GTCGCGTTTT ATACTGATTT GCTTGATGAA CTAAATCGTC GTGGCATTAA AACCTTTGTG ACCTTATACC ATTGGGATTT ACCACAACAT ATTGAAGATA ATGGTGGCTG GTTAAATCGT GAAACAGCTT ATTTGTTTGC AGACTATGCC GACAAAATTA CTCAAGCATT TGGCGATCGA GTGTATTCTT ACGCCACGTT TAACGAACCA TTTTGCAGTT CATATTTAGG CTATGAAATT GGTGTTCATG CACCAGGTTT AGCCACTAAA GCATTTGGTC GTCAATCTGC ACACCATTTA TTATTGGCTC ATGGTTTAGC CATGAAAGTA TTGCAAAAAA ATAGCCCTAA TAGCCAAAAT GGTATCGTGC TTAACTTCAC GCCTTGTTAT AGCGCAACAG ACTCTGCCGC AGATGTTGAA GCAGCCAGTA AAGCCGACCA ATACTTTAAT CAATGGTATA TCAAACCACT GTTTGACCGT TGCTACCCTG AGATTATTAA TGACTTCGCC ACTGAAGATA TGCCCGTTAT TGAACAAGGC GACTTTGATA TTATTGCTCA ACCTATCGAC TTTTTAGGCA TCAACTTTTA CACCCGAGCA GTGTACAAAG CAGATCCAGC CACTGGTTTT AGCCAAATTG ATATGGTCGA CAAACCTAAA ACGGATATCG GCTGGGAAAT ATACCCACAA TCCTTTACCG ATTTATTGAC TTCACTGCAT GCACTTTATC CTTTACCGCC GATCTACATT ACCGAAAACG GCGCAGCAAT GGACGATAAA TTGATAGAAG GTAAAGTGGA TGATCAAGAC AGACTCGAAT ACTATAACGC CCACTTAAAT GCAGTAAATA ATGCCATTGA ACAAGGTGTT AATGTTGTCG GCTATTTTGC ATGGAGTTTA ATGGACAATT TTGAATGGGC TGAAGGCTAC TTAAAACGTT TTGGGATTGT CTATGTAGAC TACGAAACTC AAAAACGCAC CTTAAAAGCC AGTGCACATG CTTATAGAGA TTTTATTAAC GCACGAAAAT AA
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Protein sequence | MKIMLPADSK MHSKAFTFGV ATASFQIEGA VDYRLPCIWD TFCATPGKIR DNSDGSQACE HVKLWREDVD LIESLGVDAY RLSISWPRVM HKDGSLNPQG VAFYTDLLDE LNRRGIKTFV TLYHWDLPQH IEDNGGWLNR ETAYLFADYA DKITQAFGDR VYSYATFNEP FCSSYLGYEI GVHAPGLATK AFGRQSAHHL LLAHGLAMKV LQKNSPNSQN GIVLNFTPCY SATDSAADVE AASKADQYFN QWYIKPLFDR CYPEIINDFA TEDMPVIEQG DFDIIAQPID FLGINFYTRA VYKADPATGF SQIDMVDKPK TDIGWEIYPQ SFTDLLTSLH ALYPLPPIYI TENGAAMDDK LIEGKVDDQD RLEYYNAHLN AVNNAIEQGV NVVGYFAWSL MDNFEWAEGY LKRFGIVYVD YETQKRTLKA SAHAYRDFIN ARK
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