Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1315 |
Symbol | |
ID | 4277377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1566740 |
End bp | 1568068 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134090 |
Product | sugar (glycoside-Pentoside-hexuronide) transporter |
Protein accession | YP_750006 |
Protein GI | 114562493 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGCA CCAGAGAAAA AATAGCTTAC GGACTCGGGG ACACTGCCAG TAATATTGTG TTCCAAACAG TCATGCTGTT TTTAACTTTT TTCTATACCG ACATTTTCGG TATCTCGCCA GCATTTGTCG GCACCATGTT TTTAGCAGTA CGCTTAATTG ATGCGGTTAC CGATCCGTTA ATGGGCGCGC TAGCAGACCG CACCAATACC CGCTGGGGTA AGTTTAGACC TTATCTTTTG TGGTTTGCCC TACCCTTTGG TTTTATCAGT GTTTTAGCCT TTACCACCCC AGACTTAACC GAAGACGGCA AAATGATTTA TGCCTTCGTC ACTTATACCG CACTTATGAT GGTCTACACC GCCATTAATA TCCCTTATTG TGCATTAGGC GGCGTGTTAA CGGCCGATCC AAAAGAGCGA GTGTCAGTAC AATCTTACCG TTTTGTATTT GCGATGTTGG GCGGCTTACT CGTTTCAGGC TTAACCTTAC CCCTTGTTGA GTACTTAGGT GAAGGCGACC AAGCTAAAGG TTATCAACTG ACGATTACCG CCATGAGCAT CTTAGGCGTT GCGATGTTTT TAGCCTGTTT CTGGGGCACT AAGGAACGCC TACACCCGCC GGTTGATCAA CAATCTAGCT TTAAGAAAGA CTTTACCGAC ATGCTCAAAA ATGACCAATG GCGTGTGCTT GCTATTGCAG CAGTATGTTT ATTATCAGGC ATGGTGTTAC GCACCAGTTT AGCCATTTAC TACGTTAAAT ATTTCCTTAA CATGCCAGAC TCCATCACCC TCTTTATCAC CCTAGGAATG GTCGGTAATA TATTTGGCTG TATTTTAGCT GAGCCTTTGG CTAAACGCTT TTGTAAAGTT AAAGCTTATA TCACCTTGCA ACTCCTTGCG GCAGCGATGT GCGTAGTGAG CTACTTTGTA CCTAGCGATC AAGTCGTACT CGCCTTTGGC ATGTTTATTA TCTGGGGCTT TACCTTCAAC ATGGCCACCC CACTATTGTG GGCAAAAATG GCTGATGTTG TCGATTATGG CCAATATAAA AACGGCGTTC GTATTACCGG GATGATTTAT TCTTCAGTGA TTTTCTTTAT CAAACTGGGT GTCGCCATTG GTGGCGCTTC TGCGGGGTGG TTATTAGCGG GTTATGGTTA TCAGCCTGAT ACCATGCAGA CGGAGCATAC TCAGCAAGGA ATATTATTAT CATTCACTAT TTACCCTGCT ATTGGTTCAT TAGTGGTGGC TTTTGTAATG CGTTGGTACA CCTTAGATAA TCAAAAAGTG GACCAAATTC ACTTAGAATT AAATAGAGAA GCAAAATAA
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Protein sequence | MISTREKIAY GLGDTASNIV FQTVMLFLTF FYTDIFGISP AFVGTMFLAV RLIDAVTDPL MGALADRTNT RWGKFRPYLL WFALPFGFIS VLAFTTPDLT EDGKMIYAFV TYTALMMVYT AINIPYCALG GVLTADPKER VSVQSYRFVF AMLGGLLVSG LTLPLVEYLG EGDQAKGYQL TITAMSILGV AMFLACFWGT KERLHPPVDQ QSSFKKDFTD MLKNDQWRVL AIAAVCLLSG MVLRTSLAIY YVKYFLNMPD SITLFITLGM VGNIFGCILA EPLAKRFCKV KAYITLQLLA AAMCVVSYFV PSDQVVLAFG MFIIWGFTFN MATPLLWAKM ADVVDYGQYK NGVRITGMIY SSVIFFIKLG VAIGGASAGW LLAGYGYQPD TMQTEHTQQG ILLSFTIYPA IGSLVVAFVM RWYTLDNQKV DQIHLELNRE AK
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