Gene Sfri_1281 details

Gene Information

• Locus tag: Sfri_1281
• Symbol: fabZ
• ID: 4278392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1515927
• End bp: 1516388
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638134056
• Product: (3R)-hydroxymyristoyl-ACP dehydratase
• Protein accession: YP_749972
• Protein GI: 114562459
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000543546
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAAACC AATTAAACAC CATGGATATT AAAGAGATAC TTAAATATCT ACCTCATAGA 
TATCCATTTT TGTTGATCGA TCGTGTATTG GACTTTACCG TAGGTGAGCA CTTACATGCG 
ATTAAAAATG TCACCATTAA TGAGCCTTTT TTCCAAGGAC ATTTTCCTAT ACAGCCTGTT 
ATGCCTGGCG TGCTCATTTT AGAAGCCATG GCACAAGCAA CGGGTTTACT TGCCTTTAAA 
ACCATGAGTA CAGAGCCGTC TCCAGAGGTG CTGTACTATT TTGCTGGTAT CGATAAAGCG 
CGTTTTAAAC GTGTTGTTGA GCCAGGCGAC CAAATACATT TTCACGTTAA AATGATTAAA 
GAGCGTCGCG GTATTGGTGT GTTTGTTGGT GAAGCCTTGG TTGATGGTGA ACTGGTTTGT 
TCTGCTGAAA TCATGTGTGC ACGTAGAGAG ATTAAGAAGT GA 

 

Protein sequence

MSNQLNTMDI KEILKYLPHR YPFLLIDRVL DFTVGEHLHA IKNVTINEPF FQGHFPIQPV 
MPGVLILEAM AQATGLLAFK TMSTEPSPEV LYYFAGIDKA RFKRVVEPGD QIHFHVKMIK 
ERRGIGVFVG EALVDGELVC SAEIMCARRE IKK