Gene Sfri_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1272 
SymbolpyrH 
ID4278383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1506013 
End bp1506750 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID638134047 
Producturidylate kinase 
Protein accessionYP_749963 
Protein GI114562450 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0528] Uridylate kinase 
TIGRFAM ID[TIGR02075] uridylate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00989068 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA ATCCAAAACC AGCGTTTAGA CGTATTCTGC TTAAATTAAG CGGTGAAGCA 
TTAATGGGTG AAGAAGGCTT CGGCATTGAC CCTAAAGTAC TTGATCGTAT GGCACAAGAA
GTGAAAGAGC TTGTTGAACT TGGTATTCAA GTTGGCGTGG TTATTGGTGG TGGTAATCTA
TTTCGTGGCG AAGGCTTAGC AAAAGCTGGT ATGAACCGCG TGGTGGGCGA TCACATGGGT
ATGTTAGCAA CCGTAATGAA TGGCTTAGCC ATGCGTGATG CCTTGCACCG TGCATATGTT
AATGCCCGTC TTATGTCTGC TATCCCACTT AAAGGTGTGT GCGATGATTA CACTTGGACA
GAAGCAATTA GCCTATTAAA GTCTGGTCGT GTGGTTATTT TTGCTGCCGG TACGGGCAAT
CCTTTTTGTA CAACCGATTC TGCAGCATGT TTACGCGGTA TTGAGATTGA AGCTGAAGTG
GTACTAAAAG GCACCAAAGT AGATGGTGTA TACTCAGCAG ACCCAATGAA AAACCCTGAA
GCGGTTAAAT ATGACACGCT TAGTTTTGCC GAAGTCCTTG AATCAGAATT AAAAGTAATG
GATCTTGCTG CATTTACTAT GGCACGTGAT CATAATATGC CGATTCTTGT ATTCAATATG
AACAAGCCAG GTGCACTTCG CCGCGTTATT ATGGGTGAGA AAGAAGGTAC GATTATTAGC
AGTAAACAAC CTGCTTAA
 
Protein sequence
MSTNPKPAFR RILLKLSGEA LMGEEGFGID PKVLDRMAQE VKELVELGIQ VGVVIGGGNL 
FRGEGLAKAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL KGVCDDYTWT
EAISLLKSGR VVIFAAGTGN PFCTTDSAAC LRGIEIEAEV VLKGTKVDGV YSADPMKNPE
AVKYDTLSFA EVLESELKVM DLAAFTMARD HNMPILVFNM NKPGALRRVI MGEKEGTIIS
SKQPA