Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1272 |
Symbol | pyrH |
ID | 4278383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1506013 |
End bp | 1506750 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134047 |
Product | uridylate kinase |
Protein accession | YP_749963 |
Protein GI | 114562450 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0528] Uridylate kinase |
TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00989068 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCA ATCCAAAACC AGCGTTTAGA CGTATTCTGC TTAAATTAAG CGGTGAAGCA TTAATGGGTG AAGAAGGCTT CGGCATTGAC CCTAAAGTAC TTGATCGTAT GGCACAAGAA GTGAAAGAGC TTGTTGAACT TGGTATTCAA GTTGGCGTGG TTATTGGTGG TGGTAATCTA TTTCGTGGCG AAGGCTTAGC AAAAGCTGGT ATGAACCGCG TGGTGGGCGA TCACATGGGT ATGTTAGCAA CCGTAATGAA TGGCTTAGCC ATGCGTGATG CCTTGCACCG TGCATATGTT AATGCCCGTC TTATGTCTGC TATCCCACTT AAAGGTGTGT GCGATGATTA CACTTGGACA GAAGCAATTA GCCTATTAAA GTCTGGTCGT GTGGTTATTT TTGCTGCCGG TACGGGCAAT CCTTTTTGTA CAACCGATTC TGCAGCATGT TTACGCGGTA TTGAGATTGA AGCTGAAGTG GTACTAAAAG GCACCAAAGT AGATGGTGTA TACTCAGCAG ACCCAATGAA AAACCCTGAA GCGGTTAAAT ATGACACGCT TAGTTTTGCC GAAGTCCTTG AATCAGAATT AAAAGTAATG GATCTTGCTG CATTTACTAT GGCACGTGAT CATAATATGC CGATTCTTGT ATTCAATATG AACAAGCCAG GTGCACTTCG CCGCGTTATT ATGGGTGAGA AAGAAGGTAC GATTATTAGC AGTAAACAAC CTGCTTAA
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Protein sequence | MSTNPKPAFR RILLKLSGEA LMGEEGFGID PKVLDRMAQE VKELVELGIQ VGVVIGGGNL FRGEGLAKAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL KGVCDDYTWT EAISLLKSGR VVIFAAGTGN PFCTTDSAAC LRGIEIEAEV VLKGTKVDGV YSADPMKNPE AVKYDTLSFA EVLESELKVM DLAAFTMARD HNMPILVFNM NKPGALRRVI MGEKEGTIIS SKQPA
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