Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1271 |
Symbol | tsf |
ID | 4278382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1505093 |
End bp | 1505944 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638134046 |
Product | elongation factor Ts |
Protein accession | YP_749962 |
Protein GI | 114562449 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000259112 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTA CTGCTGCCCA AGTTAAAGAA CTTCGTGACC GCACTGGCGC TGGCATGATG GACTGTAAGA ATGCACTGAC TGAAACTGAC GGTGACATCG AACTAGCGAT TGATAACATG CGTAAAAGCG GCGCTGCGAA GGCTGCTAAA AAAGCAGGTA ACATCGCTGC TGACGGTACA ATTCTAATCA AGAATGGCGA AGGTTTCGCT GCACTTTTAG AAGTTAACTG TCAAACTGAC TTCGTTGCAA AAGACTCAAA CTTCCTAGCA TTTGCTAACG CAGTGCTTGA TGTTGCTGCT GCATCTAAAG TGTCTATCGA AGACTTAAAA GCACAGTTTG AAGAAACTCG TGTTGCGCTT GTAACTAAAA TCGGTGAAAA CATCAACGTT CGTCGCGTTG AGTATATCGA TGGTGCAAAC CTTGCGTCTT ACCGTCACGG TGATCGTATT GGTGTTGTTG TTGCGGGTGA AGCTGATGAA GAAACACTAA AGCATATCGC AATGCACGTA GCTGCTTCTA AGCCAGATTT CGTAAACCCT GAAGATGTGC CTGCTGAACT TGTAGAAAGA GAGCAAGCGC TTCAAATCGA AATCGCGATG AATGAAGGCA AGCCTGCTGA AATCGCTGAG AAGATGGTTG TTGGTCGTAT GAAGAAGTTC ACTGGTGAGA TCTCTCTTAC TGGTCAAGCT TTCATCATGG AACCAAAGAA AACTGTTGGC GAAGTTCTTA AGTCGAAAGG CGCTACAGTA ACCAGCTTTA TTCGTTTAGA AGTTGGTGAA GGTATCGAGA AGAAAGCAGA AGATTTCGCT GCTGAAGTAG CTGCGCAAAT CGCCGCTACT AAAAAAGCGT AA
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Protein sequence | MAITAAQVKE LRDRTGAGMM DCKNALTETD GDIELAIDNM RKSGAAKAAK KAGNIAADGT ILIKNGEGFA ALLEVNCQTD FVAKDSNFLA FANAVLDVAA ASKVSIEDLK AQFEETRVAL VTKIGENINV RRVEYIDGAN LASYRHGDRI GVVVAGEADE ETLKHIAMHV AASKPDFVNP EDVPAELVER EQALQIEIAM NEGKPAEIAE KMVVGRMKKF TGEISLTGQA FIMEPKKTVG EVLKSKGATV TSFIRLEVGE GIEKKAEDFA AEVAAQIAAT KKA
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