| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1270 |
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| Symbol | rpsB |
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| ID | 4277402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1504247 |
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| End bp | 1504975 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134045 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_749961 |
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| Protein GI | 114562448 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00260886 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTACTG TTTCAATGCG CGACATGCTA CAAGCTGGTG TTCACTTCGG TCACCAAACT
CGTTACTGGA ACCCTAAGAT GAAGCCTTTC ATCTTCGGCG CTCGTAATGG TGTACACATC
ATCAACCTTG AGCATACAGT ACCAATGTTC AACGAAGCTC TAGCTTTCAT TAGCAACATT
GCTTCTAAGA AAGGTAAAGT ATTATTCGTA GGTACTAAGC GCGCTGCTGG CGAAGCTATC
AAAGCATCTG CACTTTCTTG TGATCAGTAT TATGTTGATC ATCGTTGGTT AGGCGGCATG
TTAACTAACT GGAAAACTGT TCGTCAGTCA ATCAAGCGTC TTAAAGAGCT AGAAAGCCAG
TCTGTAGACG GTACTTTCGA CAAGTTAACT AAGAAAGAAG CGTTAATGCG TTCACGCGAA
TTAGACAAGT TAGAAAAGTC TTTAGGCGGA ATCAAGAACA TGGGCGGTTT ACCTGACGTA
TTATTCGTTA TCGGTGCTGA CCATGAGCAT ATCGCGATTA AAGAAGCAAA CAACCTAGGT
ATTCCAGTTG TTGCAGTTGT TGATACCAAC TCTGCACCAG ACGGTGTTAA CTACATCGTT
CCTGGTAACG ACGACGCAAT GCGTGCTATC CGTTTGTACA CTTCTTCTGT TGCTGCAGCT
GCTAACGCTG GCCGTGGTCA AGATTTAGCT GTTCAAGCTG AGCAAGACGG TTTCGTAGAA
GCTGTTTAA
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| Protein sequence | MTTVSMRDML QAGVHFGHQT RYWNPKMKPF IFGARNGVHI INLEHTVPMF NEALAFISNI
ASKKGKVLFV GTKRAAGEAI KASALSCDQY YVDHRWLGGM LTNWKTVRQS IKRLKELESQ
SVDGTFDKLT KKEALMRSRE LDKLEKSLGG IKNMGGLPDV LFVIGADHEH IAIKEANNLG
IPVVAVVDTN SAPDGVNYIV PGNDDAMRAI RLYTSSVAAA ANAGRGQDLA VQAEQDGFVE
AV
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