Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1263 |
Symbol | |
ID | 4277395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1494481 |
End bp | 1494945 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134038 |
Product | flavodoxin |
Protein accession | YP_749954 |
Protein GI | 114562441 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.644769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGG TCAATGTTGT TTTTGGTACC GTTTATGGTA GCGCACAATT TACTGCTGAA ACAGTGACTA AGGCGATTGC AAAATTAGGC TTTACGACTA AGCTTTGGCA ACCCAATGAA TTATCTGGTT TTGTACCACC ACAAGATGAG CTATTAATTG TAGTTTCATC AACCACGGGG CAAGGGGATA TACCCGAAGA TATTTCACCT TGGTTTAGTG AACTTAAATC CAGCGCACCG TATTTACCAT TATTACAATA CAGCCTAATT GGCTTAGGCG ACTCGAGCTA TGAAACTTTT TGTGGGGCGA TAAAACAATT TGATGAATTG TTAACCGAGT TGGGCGCTAA ACCGCTGACA GAACGATTAG AAATTGACGC CTGTGAAACA ATGGAACCCG AAATAGAAGC TAAAACATGG ATAGCCAGTT GGCACAACGC CGTCACATCG GTAAACGCAG CGTAA
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Protein sequence | MKKVNVVFGT VYGSAQFTAE TVTKAIAKLG FTTKLWQPNE LSGFVPPQDE LLIVVSSTTG QGDIPEDISP WFSELKSSAP YLPLLQYSLI GLGDSSYETF CGAIKQFDEL LTELGAKPLT ERLEIDACET MEPEIEAKTW IASWHNAVTS VNAA
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