| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1202 |
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| Symbol | |
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| ID | 4278016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1411618 |
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| End bp | 1413828 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133977 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_749893 |
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| Protein GI | 114562380 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.120847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTG ATGTTGATGA AGAGATACTC CAGGACTTTT TAATTGAAGC TGGCGAGATT
TTAGAGCTTC TACAGGAGCA GCTAGTTGCT CTTGAAAATA ATCCTGATGA CAGTGATTTA
CTTAATGCTA TTTTCCGTGG ATTCCATACC GTTAAAGGTG GGGCTGGTTT TTTAAGTCTA
AAACCGATGG TTGACGTATG TCATGAAGCA GAAAACACGT TCGATTTATT ACGCACCGGT
AAACGTGGCG TAAATGCAGA ATTAATGGAT ATTATTTTGC AAGCGGTCGA CGCCATTAAT
TCCATGTTTG CTCAAACTCA ACAGGGAGAA TCACAAGACC CTGCTGATTC TGCATTACTT
GCTAAACTCA AATTATTAAG TTCGGGTGCA CCATTACCTT CAGAAATGTC GGCGGATGAA
CCGGAACCAA TTGAAAATAT TGTTGAATTT AGTGAGCCTG AATACGTCGA AGATATCAGT
ATTCCATCAA CGGAAATGTC TGACACTGGC AGTATTGATG ACATTGATGA GTCAGAATTT
GAAGCGTTGC TTGATGCCTT ACATGGTCCG GGTAAAAGTC CTGTTGCAGC TAAACCTTCT
GAAGTAAAAA AAGACAATAT TGACTCAAAG CCTGCTACAA CAATTGGTAG CGATGAAATT
ACTGATGATG AATTTGAAGC ATTATTAGAT GAATTACATG GCTCTGGTTC ATTCGAAGCT
AAAACCAAAC CTGTTGCTCC ATCTAAGCCC GCTGCAAAGC CTATTGTTGA ACCCTTGGTT
GATTCTGATG AAATCACAGA CGATGAATTT GAACGTCTTT TAGATGAATT ACATGGTAAA
GGTACTGCGC CAGTCGCTAA ATCGCAAACG CCTCCTCCAG CTCAACCTAC TAAAGCCGTC
GCACCTCCAC AAGCAGCAAA AACGAGTCCA GCCCCTACAG CTAAACCAGT AGCGACATCA
GCCCCGGCTG TTGCTTCAAA GGTTGAGCCA GTAAAAGATA AAACGCCTGC AAAAGCGGCG
TCTGTCCCAC AAGGCGAAAC AACAGTTCGT GTTGATACTG CTCGTTTAGA TCAAATCATG
AATATGGTCG GTGAGTTAGT TTTAGTGCGT AACCGATTGG TTAGTTTAGG CATTAATCGT
GAAGACGAAG AAATGTCCAA GGCGCTTGCA AACCTAGATT TGGTTACGGC TGATTTACAA
GGTGCGGTGA TGAAAACCCG CATGCAACCG ATTAAGAAAG TTTTTGGTCG TTTCCCGCGT
GTTGTTCGCG ATTTAGCTCG TACCTTAAAT AAAGAAATTG ATTTAATCAT GATTGGTGAA
GACACCGATC TTGATAAAAA CTTAGTTGAG GCATTAGCCG ATCCTTTAGT CCACTTGGTT
CGTAACTCAG TTGATCACGG TATCGAAATG CCGATTACTC GTGAAGCGAG TGGTAAATCT
CGAACCGGTA CAATTACCTT ATCGGCTAGC CAAGAAGGCG ACCATATCCT GCTTAAAATT
GAGGATGATG GCGCGGGAAT GGATCCTGAG AAACTAAAAC AAATCGCGAT AAGTCGTGGT
GTGCTTGATG AAGATGCCGC CTCGAGAATG ACCGATAACG AAGCTTATAA CTTGATTTTT
GCCCCAGGAT TTTCAACCAA AGTTGAAATT TCAGATATTT CAGGACGTGG AGTGGGTATG
GATGTGGTGA AAACCCGCAT CAACCAACTA AACGGTACTG TTTATATTGA TTCTATGAAA
GGTAAGGGCA CGGTTCTCGA AATTAAAGTG CCATTAACCT TGGCTATTAT GCCGACATTG
ATGGTTGATG TGTCTAATCA AGTTTTTGCA CTACCATTAT CGAGTGTGAA TGAAATCTTT
AATTTAGATT TAACAAAAAC CAATATAGTA GACGGTCAAT TGACGGTAAT TTTCCGTAAT
AAGGCCGTGC CATTATTCTA CCTAGAACAT TGGCTGCACA GTAAAAAATC AACATTTAAA
CATGGCGATA AAAAGCATGG TCATGTGGTT ATTGTTCAGC TTGGCACGAT GCAAATTGGT
TTTGTTGTTG ATGCATTGAT AGGCCAAGAA GAAGTTGTCA TTAAACCGCT TGGCAGTATG
TTACAAGGAA CTCCAGGAAT GGCGGGTGCG ACTATTACAT CCGATGGTGG TATTGCACTG
ATTTTAGATG TGCCAGGACT ACTAAAACAT TACGCTAAAA GCAAAAAATA A
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| Protein sequence | MSFDVDEEIL QDFLIEAGEI LELLQEQLVA LENNPDDSDL LNAIFRGFHT VKGGAGFLSL
KPMVDVCHEA ENTFDLLRTG KRGVNAELMD IILQAVDAIN SMFAQTQQGE SQDPADSALL
AKLKLLSSGA PLPSEMSADE PEPIENIVEF SEPEYVEDIS IPSTEMSDTG SIDDIDESEF
EALLDALHGP GKSPVAAKPS EVKKDNIDSK PATTIGSDEI TDDEFEALLD ELHGSGSFEA
KTKPVAPSKP AAKPIVEPLV DSDEITDDEF ERLLDELHGK GTAPVAKSQT PPPAQPTKAV
APPQAAKTSP APTAKPVATS APAVASKVEP VKDKTPAKAA SVPQGETTVR VDTARLDQIM
NMVGELVLVR NRLVSLGINR EDEEMSKALA NLDLVTADLQ GAVMKTRMQP IKKVFGRFPR
VVRDLARTLN KEIDLIMIGE DTDLDKNLVE ALADPLVHLV RNSVDHGIEM PITREASGKS
RTGTITLSAS QEGDHILLKI EDDGAGMDPE KLKQIAISRG VLDEDAASRM TDNEAYNLIF
APGFSTKVEI SDISGRGVGM DVVKTRINQL NGTVYIDSMK GKGTVLEIKV PLTLAIMPTL
MVDVSNQVFA LPLSSVNEIF NLDLTKTNIV DGQLTVIFRN KAVPLFYLEH WLHSKKSTFK
HGDKKHGHVV IVQLGTMQIG FVVDALIGQE EVVIKPLGSM LQGTPGMAGA TITSDGGIAL
ILDVPGLLKH YAKSKK
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