| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1196 |
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| Symbol | flhA |
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| ID | 4277065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1405311 |
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| End bp | 1407410 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133971 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_749887 |
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| Protein GI | 114562374 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCAA AAGCAGCTTT TGGCCAAATG AAACAAATGA AAGTATCTAC TTTTAAAGGG
ATCGGAACAC CTTTATTAGT ACTTGCTGCG TTAGGCATGG TCGTTTTACC CATTCCTGCT
TTTTTGCTAG ATATTCTGTT TTCATTCAAT ATTGCGTTGG CTTTAGTTGT ACTCTTAGTT
GCTATTTATG CTGACAGACC ACTCGATTTT GCTGCTTTCC CTACCGTATT ATTAATTGCA
ACGTTACTAA GACTTGCCCT AAACGTCGCC TCTACCCGTA TTGTATTGCT TGAAGGCCAT
AATGGTGGTG CCGCTGCGGG TAAAGTTATT GAAGCGTTTG GTTCAGTGGT CATTGGCGGC
AATTATGCCG TTGGTTTAGT GGTGTTCATT ATTCTTATTA TCATTAACTT TGCTGTGGTA
ACTAAAGGTG CGGGGCGTAT TGCTGAGGTG AGCGCTCGTT TTACCTTAGA TGCAATGCCG
GGTAAGCAAA TGGCCATTGA TGCAGATTTA AATGCTGGCA CATTAACCCA AGACCAAGCA
CGTATTCGCC GCGCCGAAGT GACTCGAGAA GCTGACTTCT ATGGTGCGAT GGATGGTGCT
TCAAAGTTTG TTAAAGGTGA TGCCATAGCA GGGATCATGA TCTTAGTCAT CAATATGATT
GGTGGATTTG TGATTGGTAT GATCCAACAT GGATTAGACT TTTCTAGCGC GGTTGAAATT
TATACCTTAC TAACCATCGG TGATGGTTTA GTTGCGCAAA TTCCCGGTTT ATTGCTGTCT
ATTGCCGCGG CCTTAATGGT AACTCGTCAA AACGAGTCTG GCGATATGGG CCAAATGATG
TTCAGTCAGA TGTTTGACAG CCATAAATCA TTAGCCATTG CAGCAGGGTT ACTCTTTATT
ATGGGTATTG TGCCTGGTAT GCCTCATGTT GCGTTTTTGA CATTTGCATT TATTACCGCT
GGTGCTGCGT ACTTTATTTA CAAGCGTAAT GTTGACAAAA AGCAAGCTGC ACTAACGTTA
GCGACTAAAG GGCCGGTTGA GAGCAAGGAT AAAGAACCTA AAGATTTAAG CTGGGACGAT
GTGCGTCATG TTGATACTAT TGGTCTTGAA GTCGGATATC GCTTAATTCC GCTGGTTGAT
AAGTCTCAAG GTGGTGAATT ATTAGGCAGA ATCAAAGGCG TACGTAAAAA ACTGTCACAA
GAATTAGGTT TTTTAGTGCC TGCGGTACAT ATTCGTGACA ATCTAGATTT ATCACCTAAT
GCGTATCGCA TTTCATTAAT GGGTGTAGTG GTAGGTGAGG CTGAAGTTAG ACATGATTGT
GAATTAGCGA TTAATCCAGG CCAAGTTTAC GGTAAGCTAG ACGGTATTGA AACTCGTGAC
CCAGCTTTTG GTTTAGAGGC GGTGTGGATA GCGCCAGAGC AACGTGAACA TGCACAAACA
TTAGGTTATA CCGTAGTCGA TACTGCAACG GTTGTAGCAA CTCACATAAG CCAGTTACTG
AGTAATAATG CTGCCAAATT ATTAGGTTAT GAAGAAGTAC AGCAGTTAAT GGATATGCTT
GCCAAGAACT CTCCTAAATT AGTGGATGGC TTTGTACCAG ATGTTATGCC TCTGGGATCC
GTTGTTAAAG TGATGCAGAA CTTACTTAAC GAAGGGGTAT CGGTACGGGA TTTACGCACC
ATTGTGCAGA CCTTGTTAGA ATACGGTACT AAGAGCAATG ACACAGAAGT ATTAACGGCA
GCAGTGCGTA TAGCGTTAAA ACGTATGATA GTGCAAGAAA TCTCAGGACC AGAACTCGAA
ATTCCTGTCA TAACATTGGC ACCAGAGTTG GAACAGATGT TGCATAAGTC TATGCAGGCG
ACTGGCGGTG AAGGACCTAA TATTGAACCC GGTCTCGCAG AACGCATGCA GCAGTCATTA
TTAGACGCTG CACAGAAGCA AGAAATGGTA GGGCAACCAG CCATTTTATT GACATCGGGT
ATGCTTAGGT CAACGCTGTC AAGATTTGTT AAATACACTA TTCCAAATTT ACGAGTGATT
TCTTATCAAG AAATTCCGGA CGAGAAACAA ATTAGAATTG TTTCTGCAGT AGGCCAATAG
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| Protein sequence | MDAKAAFGQM KQMKVSTFKG IGTPLLVLAA LGMVVLPIPA FLLDILFSFN IALALVVLLV
AIYADRPLDF AAFPTVLLIA TLLRLALNVA STRIVLLEGH NGGAAAGKVI EAFGSVVIGG
NYAVGLVVFI ILIIINFAVV TKGAGRIAEV SARFTLDAMP GKQMAIDADL NAGTLTQDQA
RIRRAEVTRE ADFYGAMDGA SKFVKGDAIA GIMILVINMI GGFVIGMIQH GLDFSSAVEI
YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQMM FSQMFDSHKS LAIAAGLLFI
MGIVPGMPHV AFLTFAFITA GAAYFIYKRN VDKKQAALTL ATKGPVESKD KEPKDLSWDD
VRHVDTIGLE VGYRLIPLVD KSQGGELLGR IKGVRKKLSQ ELGFLVPAVH IRDNLDLSPN
AYRISLMGVV VGEAEVRHDC ELAINPGQVY GKLDGIETRD PAFGLEAVWI APEQREHAQT
LGYTVVDTAT VVATHISQLL SNNAAKLLGY EEVQQLMDML AKNSPKLVDG FVPDVMPLGS
VVKVMQNLLN EGVSVRDLRT IVQTLLEYGT KSNDTEVLTA AVRIALKRMI VQEISGPELE
IPVITLAPEL EQMLHKSMQA TGGEGPNIEP GLAERMQQSL LDAAQKQEMV GQPAILLTSG
MLRSTLSRFV KYTIPNLRVI SYQEIPDEKQ IRIVSAVGQ
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