Gene Sfri_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1195 
SymbolflhB 
ID4277064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1404061 
End bp1405194 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content42% 
IMG OID638133970 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_749886 
Protein GI114562373 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA GTGACAGCGG TCAAGAACGC ACTGAAGACC CCACATCCAA ACGACTTGAA 
CAATCTCGAG AAAAAGGTCA AGTCGCTCGC TCTAAAGAGT TAGGTACCGC AGCGGTACTG
CTTGCTGCAT CTGTTGGGTT TTCGATGACA GGACCGGCAA TTGCCAAAAG TCTCTATAAT
ATTATGAAGC AAATTTTCTC GATGGAGCGC GATCAAATTT TTGATACTAA TTCCATGTTT
CGTGTATGGG GGGTCGTAGG CAGTGAACTT GCTGGGCCGT TAATTAGCTT TATTGCTTTG
CTGGCATTTG TGTCTTTCCT AGGAAATATT GTTTTAGGTG GGATGTCTTT TTCTGTCAAA
GCGTTTATGC CTAAAGGCAG TAAGTTAAAT CCCATGAACG GTTTTAAGCG TATGTTTGGC
ACCCAGGCAT TGGTTGAGCT TACTAAGGGT ATTGCTAAGT TTTCGGTGGT AGCATTATCG
GCTTATTTTT TATTAAAATT TTATTTCTAC GATATTTTGA CTCTGTCAAG CGATCACCTG
CCAGGCAATG TTTATCATGC TCTAGATTTG CTTATCTGGA TGTTCATCTT ACTCTGCAGT
TCGATGTTAT TGATTGTGAT TATTGATGTG CCATTTCAAA TTTGGAACCA CAAAAAACAG
TTAAAAATGA CTAAACAGGA AGTCAAAGAC GAATATAAAG ACACTGAAGG TAAACCTGAA
GTTAAAGGCC GGATAAGACA AATGCAGCAG GAGATGGCAC AACGGCGGAT GATGACCGAA
GTGCCTAATG CGGATGTTAT TGTGGTTAAC CCAGAGCATT ATGCTGTGGC AGTTAAATAC
GATGTCAGCC GCTCATCAGC CCCTTTTTTA ATCGCCAAAG GTGTCGATGA TGTAGCTTTT
AGAATACGTG AAATTGCTCG AGAACATAAC GTTGCTATTG TATCGGCTCC ACCGTTGGCT
CGTGCTATTT ACCACACGAC TAAAGTGGAT CAACAAGTGC CAGAAGGTTT ATTTACCGCC
GTTGCGCAGG TATTGGCTTA TGTGTTCCAA TTGAGACAGT ATCAAAAAGG TAAAGGCCGT
CGACCAAAAC CTATCCCGCT TAAACAACCC ATACCAGATG ATTTAAAACA CTAA
 
Protein sequence
MAESDSGQER TEDPTSKRLE QSREKGQVAR SKELGTAAVL LAASVGFSMT GPAIAKSLYN 
IMKQIFSMER DQIFDTNSMF RVWGVVGSEL AGPLISFIAL LAFVSFLGNI VLGGMSFSVK
AFMPKGSKLN PMNGFKRMFG TQALVELTKG IAKFSVVALS AYFLLKFYFY DILTLSSDHL
PGNVYHALDL LIWMFILLCS SMLLIVIIDV PFQIWNHKKQ LKMTKQEVKD EYKDTEGKPE
VKGRIRQMQQ EMAQRRMMTE VPNADVIVVN PEHYAVAVKY DVSRSSAPFL IAKGVDDVAF
RIREIAREHN VAIVSAPPLA RAIYHTTKVD QQVPEGLFTA VAQVLAYVFQ LRQYQKGKGR
RPKPIPLKQP IPDDLKH