Gene Sfri_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1193 
Symbol 
ID4277062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1402975 
End bp1403244 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content39% 
IMG OID638133968 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_749884 
Protein GI114562371 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCAG AATCGCTCAT TGATATCTTT CGAGAAGCAC TATCGGTTAT CGTATTAATT 
GTGTCAGCGA TTATTTTACC AGGCTTATTC ATCGGTTTAA TTGTGGCGGT ATTTCAGGCC
GCGACATCCA TTAACGAACA AACCTTAAGC TTTTTACCAC GTTTATTGGT GACGTTATTC
GCGTTGATGT TTTTAGGCCA TTGGCTAGTG CAAACCATGA TGGATTTTTT CTTTGAGATG
GTTAATCTCA TCCCACAGGT TATAGGTTAA
 
Protein sequence
MSPESLIDIF REALSVIVLI VSAIILPGLF IGLIVAVFQA ATSINEQTLS FLPRLLVTLF 
ALMFLGHWLV QTMMDFFFEM VNLIPQVIG