Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1193 |
Symbol | |
ID | 4277062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1402975 |
End bp | 1403244 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638133968 |
Product | flagellar biosynthetic protein FliQ |
Protein accession | YP_749884 |
Protein GI | 114562371 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCCAG AATCGCTCAT TGATATCTTT CGAGAAGCAC TATCGGTTAT CGTATTAATT GTGTCAGCGA TTATTTTACC AGGCTTATTC ATCGGTTTAA TTGTGGCGGT ATTTCAGGCC GCGACATCCA TTAACGAACA AACCTTAAGC TTTTTACCAC GTTTATTGGT GACGTTATTC GCGTTGATGT TTTTAGGCCA TTGGCTAGTG CAAACCATGA TGGATTTTTT CTTTGAGATG GTTAATCTCA TCCCACAGGT TATAGGTTAA
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Protein sequence | MSPESLIDIF REALSVIVLI VSAIILPGLF IGLIVAVFQA ATSINEQTLS FLPRLLVTLF ALMFLGHWLV QTMMDFFFEM VNLIPQVIG
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