| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1184 |
|---|
| Symbol | fliH |
|---|
| ID | 4277053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1394810 |
|---|
| End bp | 1396021 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638133959 |
|---|
| Product | flagellar assembly protein H |
|---|
| Protein accession | YP_749875 |
|---|
| Protein GI | 114562362 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAT CAAAATCGCC TAAAGATGCA CTCAATACGG ATAGCGAGTA TGAATTTAGT
CATTGGCAAT TACCTGATAT TACCAAAGAT AGTAGCCTAG AACCTTCAAA TTTGTTCGGT
CAGTTTTCTG AAGCCCACAC GCCTACTCCT GTTACTGGGG CCGAGAAGTC TATGGCGCCA
CCGACTATGG CGCAAATTGA AGACATCCGC GCTGCAGCTG AGCAAGAAGG ATTTGAACAG
GGTAAGCAAG AAGGTCATCA ACAAGGATTA GAGCAAGGGC GTTTAGAAGG ACTGGAGCAA
GGTCATCAAC AAGGGTTTAC TCAAGGCGAG CAACAAGGAT TAGAAGCTGG GCAAATTAAA
GCCAATGAGC TTATTGCACA ACTTAACCAC ATTATTTCCC AATTCGAGTT ACCATTATCC
ATCTTAGATA ATGAAATTGA AGCTGAATTA TTGGCCATGA CAATCAGTTT AGCCAAATCG
GTTATCGGCC ATGAACTTAA GACTCACCCA GAACATATAT TATCGGCTTT ACGTCAAGGT
GTTGACGCAC TTCCATTAAA AGAACAGTTG GTTAAGTTAC GTTTTAATCA GGCTGACGCT
GAACTCGTAA ACCAATGTTA CAGTGCCGAA CAATTGCAAA GAAATCAATG GCAAATCGAT
ATTGATCCAA CGTTAGCTAA TGGTGACTGT ATGATTGAAA GTGTCCGTTC TGCTGTCGAT
TTACGTGTAG AACAGCGTAT TAGCCAAGTG TTTAGTGAAT TAGACGCTCA ATCGAATCAG
TTAGCAAAAA ATGTCCAGCA GCAAAAATCA ACTCATCCAC AATATCAAAC CACATCTGTC
GATAATTTGA GTGAACATCA GCAAGCCGCT GAGCTTGCAG GTAGAACCGA TAGCACAGAA
AACACCGATA GGGACGAGAT TGGCCAAGGT GATGTTGAAG AACTTGGCGC AGAGATGGGC
GCTGATAAGG TTGCAGAACC GTTAGTTCAA CAAATTGATA CTTCTTCGGC AGCGTCAATC
GATGCTGAAG ACTCTGATGT TGTTGATTCT GATGGAGGTG TAACTCTCGA TACAAGCACG
CCTCTCGATA CAAGTGCGCC TCTCAATACA AATGCACAAG CTGACACCTC AATAGCTGAT
AAAGTGGCTG ATGCTCAGCA ACAGACGAAA GACCTATCTC AAGGAAATAC CGATGAGCAC
TCGTCAACAT AA
|
|---|
| Protein sequence | MPESKSPKDA LNTDSEYEFS HWQLPDITKD SSLEPSNLFG QFSEAHTPTP VTGAEKSMAP
PTMAQIEDIR AAAEQEGFEQ GKQEGHQQGL EQGRLEGLEQ GHQQGFTQGE QQGLEAGQIK
ANELIAQLNH IISQFELPLS ILDNEIEAEL LAMTISLAKS VIGHELKTHP EHILSALRQG
VDALPLKEQL VKLRFNQADA ELVNQCYSAE QLQRNQWQID IDPTLANGDC MIESVRSAVD
LRVEQRISQV FSELDAQSNQ LAKNVQQQKS THPQYQTTSV DNLSEHQQAA ELAGRTDSTE
NTDRDEIGQG DVEELGAEMG ADKVAEPLVQ QIDTSSAASI DAEDSDVVDS DGGVTLDTST
PLDTSAPLNT NAQADTSIAD KVADAQQQTK DLSQGNTDEH SST
|
|---|
| |